Update dependencies and fix error logging

Added 'tabulate' and pinned 'jsonschema2md' version in setup.py to fix CI errors.

Author: matentzn

setup.py

@@ -41,7 +41,7 @@ def update_relative_links(readme_content):
     package_dir={'': 'src'},
     packages=["dosdp", "schema", "dosdp.document", "dosdp.document.pattern", "dosdp.document.schema"],
     include_package_data=True,
-    install_requires=["PyYAML", "jsonschema", "requests", "jsonpath_rw", "ruamel.yaml", "jsonschema2md", "pandas"],
+    install_requires=["PyYAML", "jsonschema", "requests", "jsonpath_rw", "ruamel.yaml", "jsonschema2md>=0.4,<0.5", "pandas", "tabulate"],
     entry_points={
         "console_scripts": [
             "dosdp=dosdp.__main__:main",

src/dosdp/document/pattern/patterns_create_docs.py

@@ -136,7 +136,7 @@ def generate_pattern_documentation(pattern_file, md_file_path, sample_data_dir=N
                 else:
                     print("No matches!")
             except Exception as e:
-                logging.error("Error processing the tsv file!", e)
+                logging.error("Error processing the tsv file! %s", e)
         else:
             logging.warning("Data dir: '" + os.path.join(str(sample_data_dir),
                                                          sample_file) + "' does not exist to provide sample data!")