diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml deleted file mode 100644 index 3885a43..0000000 --- a/.github/workflows/CI.yml +++ /dev/null @@ -1,79 +0,0 @@ -name: CI -on: - push: - branches: - - main - tags: ['*'] - pull_request: - workflow_dispatch: -concurrency: - # Skip intermediate builds: always. - # Cancel intermediate builds: only if it is a pull request build. - group: ${{ github.workflow }}-${{ github.ref }} - cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }} -jobs: - test: - name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - runs-on: ${{ matrix.os }} - timeout-minutes: 60 - permissions: # needed to allow julia-actions/cache to proactively delete old caches that it has created - actions: write - contents: read - strategy: - fail-fast: false - matrix: - version: - # - 'lts' # TODO: Reenable once dependencies get registered. - - '1' - os: - - ubuntu-latest - - macOS-latest - - windows-latest - arch: - - x64 - steps: - - uses: actions/checkout@v4 - - uses: julia-actions/setup-julia@v2 - with: - version: ${{ matrix.version }} - arch: ${{ matrix.arch }} - - uses: julia-actions/cache@v2 - - uses: julia-actions/julia-buildpkg@v1 - - uses: julia-actions/julia-runtest@v1 - - uses: julia-actions/julia-processcoverage@v1 - - uses: codecov/codecov-action@v5 - with: - files: lcov.info - token: ${{ secrets.CODECOV_TOKEN }} - fail_ci_if_error: false - docs: - name: Documentation - runs-on: ubuntu-latest - permissions: - actions: write # needed to allow julia-actions/cache to proactively delete old caches that it has created - contents: write - statuses: write - steps: - - uses: actions/checkout@v4 - - uses: julia-actions/setup-julia@v2 - with: - version: '1' - - uses: julia-actions/cache@v2 - - name: Configure doc environment - shell: julia --project=docs --color=yes {0} - run: | - using Pkg - Pkg.develop(PackageSpec(path=pwd())) - Pkg.instantiate() - - uses: julia-actions/julia-buildpkg@v1 - - uses: julia-actions/julia-docdeploy@v1 - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} - - name: Run doctests - shell: julia --project=docs --color=yes {0} - run: | - using Documenter: DocMeta, doctest - using TensorAlgebra - DocMeta.setdocmeta!(TensorAlgebra, :DocTestSetup, :(using TensorAlgebra); recursive=true) - doctest(TensorAlgebra) diff --git a/.github/workflows/Documentation.yml b/.github/workflows/Documentation.yml new file mode 100644 index 0000000..01a7f7a --- /dev/null +++ b/.github/workflows/Documentation.yml @@ -0,0 +1,23 @@ +name: "Documentation" + +on: + push: + branches: + - main + tags: '*' + pull_request: + schedule: + - cron: '1 4 * * 4' + +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + cancel-in-progress: ${{ github.ref_name != github.event.repository.default_branch || github.ref != 'refs/tags/v*' }} + +jobs: + build-and-deploy-docs: + name: "Documentation" + uses: "ITensor/ITensorActions/.github/workflows/Documentation.yml@main" + with: + localregistry: https://github.com/ITensor/ITensorRegistry.git + secrets: + CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} diff --git a/.github/workflows/FormatCheck.yml b/.github/workflows/FormatCheck.yml index bb6d933..3f78afc 100644 --- a/.github/workflows/FormatCheck.yml +++ b/.github/workflows/FormatCheck.yml @@ -1,35 +1,13 @@ -name: Format check +name: "Format Check" + on: push: - branches: [main] - tags: [v*] + branches: + - 'main' + tags: '*' pull_request: jobs: - format: + format-check: name: "Format Check" - runs-on: ubuntu-latest - steps: - - uses: actions/checkout@v4 - - uses: julia-actions/setup-julia@v2 - with: - version: 1 - - name: Install JuliaFormatter and format - run: | - julia -e 'using Pkg; Pkg.add(PackageSpec(name="JuliaFormatter"))' - julia -e 'using JuliaFormatter; format(".", verbose=true)' - - name: Check format - run: | - julia -e ' - out = Cmd(`git diff --name-only`) |> read |> String - if out == "" - exit(0) - else - @error "The following files have not been formatted:" - write(stdout, out) - out_diff = Cmd(`git diff`) |> read |> String - @error "Diff:" - write(stdout, out_diff) - exit(1) - @error "" - end' + uses: "ITensor/ITensorActions/.github/workflows/FormatCheck.yml@main" diff --git a/.github/workflows/LiterateCheck.yml b/.github/workflows/LiterateCheck.yml index ade2453..2ca5f27 100644 --- a/.github/workflows/LiterateCheck.yml +++ b/.github/workflows/LiterateCheck.yml @@ -1,39 +1,15 @@ -name: Literate check +name: "Literate Check" + on: push: - branches: [main] - tags: [v*] + branches: + - 'main' + tags: '*' pull_request: jobs: literate: name: "Literate Check" - runs-on: ubuntu-latest - steps: - - uses: actions/checkout@v4 - - uses: julia-actions/setup-julia@v2 - with: - version: 1 - - name: Install Literate and generate docs - run: | - julia -e ' - using Pkg - Pkg.develop(PackageSpec(path=pwd())) - Pkg.instantiate() - Pkg.add(PackageSpec(name="Literate"))' - julia -e 'include("docs/make_readme.jl")' - - name: Check if docs need to be updated - run: | - julia -e ' - out = Cmd(`git diff --name-only`) |> read |> String - if out == "" - exit(0) - else - @error "The docs are outdated, rerun Literate to regenerate them." - write(stdout, out) - out_diff = Cmd(`git diff`) |> read |> String - @error "Diff:" - write(stdout, out_diff) - exit(1) - @error "" - end' + uses: "ITensor/ITensorActions/.github/workflows/LiterateCheck.yml@main" + with: + localregistry: https://github.com/ITensor/ITensorRegistry.git diff --git a/.github/workflows/Tests.yml b/.github/workflows/Tests.yml new file mode 100644 index 0000000..5a0a306 --- /dev/null +++ b/.github/workflows/Tests.yml @@ -0,0 +1,42 @@ +name: Tests +on: + push: + branches: + - 'master' + - 'main' + - 'release-' + tags: '*' + paths-ignore: + - 'docs/**' + pull_request: + workflow_dispatch: + +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + # Cancel intermediate builds: only if it is a pull request build. + cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }} + +jobs: + tests: + name: "Tests" + strategy: + fail-fast: false + matrix: + version: + - 'lts' # minimal supported version + - '1' # latest released Julia version + # group: + # - 'core' + # - 'optional' + os: + - ubuntu-latest + - macOS-latest + - windows-latest + uses: "ITensor/ITensorActions/.github/workflows/Tests.yml@main" + with: + group: "${{ matrix.group }}" + julia-version: "${{ matrix.version }}" + os: "${{ matrix.os }}" + localregistry: https://github.com/ITensor/ITensorRegistry.git + secrets: + CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index bff1fb7..6599365 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -7,7 +7,8 @@ repos: - id: check-yaml - id: end-of-file-fixer exclude_types: [markdown] # incompatible with Literate.jl -- repo: https://github.com/qiaojunfeng/pre-commit-julia-format - rev: v0.2.0 + +- repo: "https://github.com/domluna/JuliaFormatter.jl" + rev: v1.0.62 hooks: - - id: julia-format + - id: "julia-formatter" diff --git a/Project.toml b/Project.toml index dcfce15..5df2370 100644 --- a/Project.toml +++ b/Project.toml @@ -16,27 +16,11 @@ GradedUnitRanges = "e2de450a-8a67-46c7-b59c-01d5a3d041c5" [extensions] TensorAlgebraGradedUnitRangesExt = "GradedUnitRanges" -[sources] -GradedUnitRanges = {url = "https://github.com/ITensor/GradedUnitRanges.jl"} -LabelledNumbers = {url = "https://github.com/ITensor/LabelledNumbers.jl"} - [compat] -Aqua = "0.8.9" ArrayLayouts = "1.10.4" BlockArrays = "1.2.0" EllipsisNotation = "1.8.0" GradedUnitRanges = "0.1.0" -LabelledNumbers = "0.1.0" LinearAlgebra = "1.10" -Test = "1.10" TupleTools = "1.6.0" julia = "1.10" - -[extras] -Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595" -GradedUnitRanges = "e2de450a-8a67-46c7-b59c-01d5a3d041c5" -LabelledNumbers = "f856a3a6-4152-4ec4-b2a7-02c1a55d7993" -Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" - -[targets] -test = ["Aqua", "Test"] diff --git a/README.md b/README.md index d6162ab..7c4989b 100644 --- a/README.md +++ b/README.md @@ -2,17 +2,31 @@ [![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://ITensor.github.io/TensorAlgebra.jl/stable/) [![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://ITensor.github.io/TensorAlgebra.jl/dev/) -[![Build Status](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/CI.yml/badge.svg?branch=main)](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/CI.yml?query=branch%3Amain) +[![Build Status](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/Tests.yml/badge.svg?branch=main)](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/Tests.yml?query=branch%3Amain) [![Coverage](https://codecov.io/gh/ITensor/TensorAlgebra.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/ITensor/TensorAlgebra.jl) [![Code Style: Blue](https://img.shields.io/badge/code%20style-blue-4495d1.svg)](https://github.com/invenia/BlueStyle) [![Aqua](https://raw.githubusercontent.com/JuliaTesting/Aqua.jl/master/badge.svg)](https://github.com/JuliaTesting/Aqua.jl) ## Installation instructions +This package resides in the `ITensor/ITensorRegistry` local registry. +In order to install, simply add that registry through your package manager. +This step is only required once. ```julia julia> using Pkg: Pkg -julia> Pkg.add(url="https://github.com/ITensor/TensorAlgebra.jl") +julia> Pkg.Registry.add(url="https://github.com/ITensor/ITensorRegistry") +``` +or: +```julia +julia> Pkg.Registry.add(url="git@github.com:ITensor/ITensorRegistry.git") +``` +if you want to use SSH credentials, which can make it so you don't have to enter your Github ursername and password when registering packages. + +Then, the package can be added as usual through the package manager: + +```julia +julia> Pkg.add("TensorAlgebra") ``` ## Examples diff --git a/examples/README.jl b/examples/README.jl index 69f2260..33853d4 100644 --- a/examples/README.jl +++ b/examples/README.jl @@ -2,18 +2,36 @@ # # [![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://ITensor.github.io/TensorAlgebra.jl/stable/) # [![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://ITensor.github.io/TensorAlgebra.jl/dev/) -# [![Build Status](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/CI.yml/badge.svg?branch=main)](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/CI.yml?query=branch%3Amain) +# [![Build Status](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/Tests.yml/badge.svg?branch=main)](https://github.com/ITensor/TensorAlgebra.jl/actions/workflows/Tests.yml?query=branch%3Amain) # [![Coverage](https://codecov.io/gh/ITensor/TensorAlgebra.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/ITensor/TensorAlgebra.jl) # [![Code Style: Blue](https://img.shields.io/badge/code%20style-blue-4495d1.svg)](https://github.com/invenia/BlueStyle) # [![Aqua](https://raw.githubusercontent.com/JuliaTesting/Aqua.jl/master/badge.svg)](https://github.com/JuliaTesting/Aqua.jl) # ## Installation instructions +# This package resides in the `ITensor/ITensorRegistry` local registry. +# In order to install, simply add that registry through your package manager. +# This step is only required once. #= ```julia julia> using Pkg: Pkg -julia> Pkg.add(url="https://github.com/ITensor/TensorAlgebra.jl") +julia> Pkg.Registry.add(url="https://github.com/ITensor/ITensorRegistry") +``` +=# +# or: +#= +```julia +julia> Pkg.Registry.add(url="git@github.com:ITensor/ITensorRegistry.git") +``` +=# +# if you want to use SSH credentials, which can make it so you don't have to enter your Github ursername and password when registering packages. + +# Then, the package can be added as usual through the package manager: + +#= +```julia +julia> Pkg.add("TensorAlgebra") ``` =# diff --git a/src/LinearAlgebraExtensions/qr.jl b/src/LinearAlgebraExtensions/qr.jl index 7c0d3f0..903efa9 100644 --- a/src/LinearAlgebraExtensions/qr.jl +++ b/src/LinearAlgebraExtensions/qr.jl @@ -47,6 +47,7 @@ function LinearAlgebra.qr(a::LayoutMatrix, biperm::BlockedPermutation{2}) end # TODO: Define in terms of an inner function `_qr` or `tensor_qr`. +# TODO: this is type piracy function LinearAlgebra.qr( a::AbstractArray, labels_a::Tuple, labels_q::Tuple, labels_r::Tuple ) diff --git a/src/fusedims.jl b/src/fusedims.jl index c118dc6..35a2823 100644 --- a/src/fusedims.jl +++ b/src/fusedims.jl @@ -29,13 +29,17 @@ end ⊗() = Base.OneTo(1) # Overload this version for most arrays -function fusedims(a::AbstractArray, axes::AbstractUnitRange...) - return fusedims(FusionStyle(a), a, axes...) +function fusedims(a::AbstractArray, ax::AbstractUnitRange, axes::AbstractUnitRange...) + return fusedims(FusionStyle(a), a, ax, axes...) end # Overload this version for fusion tensors, array maps, etc. -function fusedims(a::AbstractArray, axesblocks::Tuple{Vararg{AbstractUnitRange}}...) - return fusedims(a, flatten_tuples(axesblocks)...) +function fusedims( + a::AbstractArray, + axb::Tuple{Vararg{AbstractUnitRange}}, + axesblocks::Tuple{Vararg{AbstractUnitRange}}..., +) + return fusedims(a, flatten_tuples((axb, axesblocks...))...) end # Fix ambiguity issue diff --git a/test/Project.toml b/test/Project.toml index 2b28574..487e9ee 100644 --- a/test/Project.toml +++ b/test/Project.toml @@ -10,12 +10,14 @@ NDTensors = "23ae76d9-e61a-49c4-8f12-3f1a16adf9cf" Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" TensorAlgebra = "68bd88dc-f39d-4e12-b2ca-f046b68fcc6a" TensorOperations = "6aa20fa7-93e2-5fca-9bc0-fbd0db3c71a2" +Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595" +SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f" +Suppressor = "fd094767-a336-5f1f-9728-57cf17d0bbfb" Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" -[sources] -GradedUnitRanges = {url = "https://github.com/ITensor/GradedUnitRanges.jl"} -LabelledNumbers = {url = "https://github.com/ITensor/LabelledNumbers.jl"} -TensorAlgebra = {path = ".."} - [compat] TensorOperations = "4.1.1" +Aqua = "0.8.9" +SafeTestsets = "0.1" +Suppressor = "0.2" +Test = "1.10" diff --git a/test/runtests.jl b/test/runtests.jl index 243e751..bd97441 100644 --- a/test/runtests.jl +++ b/test/runtests.jl @@ -1,12 +1,61 @@ -@eval module $(gensym()) -using Test: @testset +using SafeTestsets: @safetestset +using Suppressor: Suppressor -@testset "TensorAlgebra.jl" begin - filenames = filter(readdir(@__DIR__)) do f - startswith("test_")(f) && endswith(".jl")(f) +# check for filtered groups +# either via `--group=ALL` or through ENV["GROUP"] +const pat = r"(?:--group=)(\w+)" +arg_id = findfirst(contains(pat), ARGS) +const GROUP = uppercase( + if isnothing(arg_id) + get(ENV, "GROUP", "ALL") + else + only(match(pat, ARGS[arg_id]).captures) + end, +) + +"match files of the form `test_*.jl`, but exclude `*setup*.jl`" +istestfile(fn) = + endswith(fn, ".jl") && startswith(basename(fn), "test_") && !contains(fn, "setup") +"match files of the form `*.jl`, but exclude `*_notest.jl` and `*setup*.jl`" +isexamplefile(fn) = + endswith(fn, ".jl") && !endswith(fn, "_notest.jl") && !contains(fn, "setup") + +@time begin + # tests in groups based on folder structure + for testgroup in filter(isdir, readdir(@__DIR__)) + if GROUP == "ALL" || GROUP == uppercase(testgroup) + for file in filter(istestfile, readdir(joinpath(@__DIR__, testgroup); join=true)) + @eval @safetestset $file begin + include($file) + end + end + end + end + + # single files in top folder + for file in filter(istestfile, readdir(@__DIR__)) + (file == basename(@__FILE__)) && continue # exclude this file to avoid infinite recursion + @eval @safetestset $file begin + include($file) + end end - @testset "Test $filename" for filename in filenames - include(filename) + + # test examples + examplepath = joinpath(@__DIR__, "..", "examples") + for (root, _, files) in walkdir(examplepath) + contains(chopprefix(root, @__DIR__), "setup") && continue + for file in filter(isexamplefile, files) + filename = joinpath(root, file) + @eval begin + @safetestset $file begin + $(Expr( + :macrocall, + GlobalRef(Suppressor, Symbol("@suppress")), + LineNumberNode(@__LINE__, @__FILE__), + :(include($filename)), + )) + end + end + end end end -end diff --git a/test/test_aqua.jl b/test/test_aqua.jl new file mode 100644 index 0000000..5c6c040 --- /dev/null +++ b/test/test_aqua.jl @@ -0,0 +1,8 @@ +using TensorAlgebra: TensorAlgebra +using Aqua: Aqua +using Test: @testset + +@testset "Code quality (Aqua.jl)" begin + # TODO: fix and re-enable ambiguity checks + Aqua.test_all(TensorAlgebra; ambiguities=false, piracies=false) +end diff --git a/test/test_basics.jl b/test/test_basics.jl index 59065a1..7421879 100644 --- a/test/test_basics.jl +++ b/test/test_basics.jl @@ -1,4 +1,3 @@ -@eval module $(gensym()) using BlockArrays: blockfirsts, blocklasts, blocklength, blocklengths, blocks using Combinatorics: permutations using EllipsisNotation: var".." @@ -196,4 +195,3 @@ end ) @test a ≈ a′ end -end diff --git a/test/test_gradedunitrangesext_basics.jl b/test/test_gradedunitrangesext_basics.jl index fbb0219..881c151 100644 --- a/test/test_gradedunitrangesext_basics.jl +++ b/test/test_gradedunitrangesext_basics.jl @@ -1,4 +1,3 @@ -@eval module $(gensym()) using BlockArrays: Block using TensorAlgebra: ⊗ using GradedUnitRanges: GradedUnitRanges, gradedrange, label @@ -27,4 +26,3 @@ GradedUnitRanges.fuse_labels(l1::U1, l2::U1) = U1(l1.dim + l2.dim) @test a[Block(3)] == 16:23 @test a[Block(4)] == 24:35 end -end diff --git a/test/test_gradedunitrangesext_contract.jl b/test/test_gradedunitrangesext_contract.jl index 51f1ef4..2b0655f 100644 --- a/test/test_gradedunitrangesext_contract.jl +++ b/test/test_gradedunitrangesext_contract.jl @@ -1,4 +1,3 @@ -@eval module $(gensym()) using Test: @test_skip # TODO: Add this back once `BlockSparseArrays` is set up. @test_skip begin @@ -36,4 +35,3 @@ using Test: @test_skip @test a_dest ≈ a_dest_dense end end -end