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README.md

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@@ -44,7 +44,7 @@ from idc_index import IDCClient
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client = IDCClient.client()
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```
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You can use [IDC Portal](https://imaging.datacommons.cancer.gov/explore) to
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You can use [IDC Portal](https://imaging.datacommons.cancer.gov/explore/) to
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browse collections, cases, studies and series, copy their identifiers and
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download the corresponding files using `idc-index` helper functions.
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)
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```
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## The `indices` of `idc-index`
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`idc-index` is named this way because it wraps indices of IDC data: tables
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containing the most important metadata attributes describing the files available
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in IDC. The main metadata index is available in the `index` variable (which is a
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pandas `DataFrame`) of `IDCClient`. Additional index tables such as the
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`clinical_index` contain non-DICOM clinical data or slide microscopy specific
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tables (indicated by the prefix `sm`) include metadata attributes specific to
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slide microscopy images. A description of available attributes for all indices
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can be found [here](column_descriptions).
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## Tutorial
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Please check out

docs/column_descriptions.md

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# Metadata attributes in `idc-index`'s index tables
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`idc-index` is named this way because it wraps indices of IDC data: tables
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containing the most important metadata attributes describing the files available
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in IDC. The main metadata index is available in the `index` variable (which is a
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pandas `DataFrame`) of `IDCClient`. Additional index tables such as the
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`clinical_index` contain non-DICOM clinical data or slide microscopy specific
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tables (indicated by the prefix `sm`) include metadata attributes specific to
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slide microscopy images.
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## `index`
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The following is the list of the columns included in `index`. You can use those

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