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subject-template.yaml
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162 lines (162 loc) · 5.97 KB
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Document:
author: Reema Gupta
id: 441070ce-ba26-4759-bb29-58ddfba17737
sections:
- definition: Subject-template template schema generated by the CEDAR Template Editor
2.6.56
id: 8eb9dbea-3d62-42c4-aa4e-5c13f93b0baa
name: subject
properties:
- definition: A free text element to allow the user to provide any additional
information.
id: e99ee529-07b8-4404-b725-39020f2b6cb2
name: free-text-field
value: []
sections:
- definition: Header to be used for metadata templates created for In2PB projects.
id: 94d00140-56bd-4fd1-b4de-f44ddb3d5a5f
name: in2pb-header
properties:
- definition: Header to be used for metadata templates created for In2PB projects.
id: cb5fa390-c2ef-468c-8fd3-16875206d913
name: in2pb-header
value: []
sections: []
type: n.s.
- definition: Header with instructions for the subject metadata.
id: 4337ed2b-e317-4091-ab18-4ed4d47a82c6
name: subject-header
properties:
- definition: Header with instructions for the subject metadata.
id: 0d8b1622-3d13-4687-b78d-469c481a299c
name: subject-header
value: []
sections: []
type: n.s.
- definition: Metadata relating to the subject of the experiment.
id: 53713f71-099f-43e3-b630-99ef25e77fa5
name: subject-general-element
properties:
- definition: Unique identifier for the subject.
id: ec881fed-406b-4758-a76e-0d439914bc6a
name: subjectID
value: []
- definition: Binomial species name from NCBI taxonomy
id: 0be3e0ac-f0f3-477f-ad21-b0c0411847e0
name: subjectSpecies
value: []
- definition: 'String value indicating the strain of the species, for example:
C57BL/6J.'
id: e438afca-5a4b-49cd-93e8-5c98f1240efc
name: subejctSpeciesStrain
value: []
- definition: Research resource identifier (RRID) of the strain of the species.
id: 4c10064f-e488-420e-a95b-520e2a6668e4
name: subjectSpeciesStrainRRID
value: []
- definition: Commonly used species name.
id: bcdbd40e-8e31-4ff8-8c17-b8befaf739ff
name: subjectTrivialName
value: []
- definition: Abbreviated identifier of the subject, for instance, identifier
used in file names.
id: efd9a039-d689-434b-b679-dfa319c3edd3
name: subjectAbbreviatedID
value: []
- definition: Sex of the subject being defined.
id: a051255b-1183-49b3-be0c-2aaa038f5830
name: genotypic sex
value: []
- definition: Birthdate of the subject, if available.
id: e1ca6891-ee8b-4c56-9bd5-16764ea225db
name: subjectBirthDate
value: []
- definition: Age of the participant at time of begining of recording (first
data point recorded) in years.
id: d845087a-7d36-49af-9417-96f2ac108803
name: subjectAge
value: []
- definition: Remarks on the general characteristics of the subject, if any.
id: a6fd1c24-6b8f-477f-ac1e-37e8052d524c
name: subjectCharacter
value: []
sections: []
type: n.s.
- definition: Information on training of the animal.
id: 8ec1c87c-0bc0-475e-9d9d-b103c11ea7f7
name: subject-training-element
properties:
- definition: Identifier of the subject who was trained.
id: b73dbeec-681d-4875-9e5e-9dfdcd902db9
name: subjectID
value: []
- definition: Type of training being described.
id: c1cb556f-64e4-45c4-bf39-a7e0078563ae
name: trainingType
value: []
- definition: Date of the start of the training.
id: 37d82f37-f3aa-48af-8994-1e8a0ac99bbc
name: trainingStartDate
value: []
- definition: Date of the end of the training.
id: 67961f64-b0f9-45fc-80a7-7cd7edceaf06
name: trainingEndDate
value: []
- definition: List of people responsible for training of the subject.
id: 1b1a7c57-bd98-4433-89a4-1e4342fd114f
name: trainingCoaches
value: []
- definition: Remarks on the training procedure.
id: f4abb9c9-b19d-4033-9e7f-b2bf179dcc67
name: trainingComments
value: []
sections: []
type: n.s.
- definition: Information on surgeries performed on of the animal.
id: 4acd9931-7268-47e7-aad5-8508391f0f3d
name: subject-surgery-element
properties:
- definition: Identifier of the subject on which the surgery was performed.
id: bcb958dc-a298-484d-a512-cf293c8065f2
name: subjectID
value: []
- definition: Type of the surgery performed.
id: 65fd2947-1445-40d1-a901-94a3e324cc7d
name: surgeryType
value: []
- definition: Weight of the subject at the start of surgery in kilograms.
id: e66ac267-8d7e-4e88-8c67-e6c0f34ad9f6
name: subjectWeight
value: []
- definition: Duration of the surgery in hours.
id: fbe81d38-af2a-47e5-bef8-dbfa1488f028
name: surgeryDuration
value: []
- definition: List of people responsible for the surgery.
id: ee394fa3-2058-422b-8cdd-9af0548845cc
name: surgeonNames
value: []
- definition: Hemisphere on which the surgery was performed.
id: 39fd501f-0fb3-4d01-a783-2e9880eb092b
name: surgeryHemisphere
value: []
- definition: List of anatomical locations of the surgery.
id: 92e49673-b281-4efe-bc54-460b065c118e
name: surgeryAnatomicalLocation
value: []
- definition: Remarks on the surgery.
id: f872bf86-6f98-44bb-855b-24c8420195cd
name: surgeryComments
value: []
sections: []
type: n.s.
- definition: A free text element to allow the user to provide any additional
information.
id: c60709b5-89e5-4204-9852-67fb63bd00b5
name: free-text-field
properties: []
sections: []
type: n.s.
type: n.s.
version: '1.0'
odml-version: '1.1'