CRAN RC 0.12.0 (#861)

* bump deps

* fix regression

* bump Pandoc version

* bump deps

* bump versions

* update actions

* Update check-readme.yaml

* remove redundant `pairwise.comparisons` arg

closes #858

* also update vignettes for the API change

* use roxyglobals

to automate generating global variables

* fix styler workflow; minor styling

* clean up comments; bump Pandoc

* minor

* use latest versions for pairwise comparisons

* skip on devel for now

* rstantools needed?

* run random order check on R-release

* use per-operation grouping feature

* use glue for creating expressions

* Apply automatic changes

* Update faq.Rmd

closes #864

* CRAN submission

---------

Co-authored-by: IndrajeetPatil <IndrajeetPatil@users.noreply.github.com>

Author: IndrajeetPatil

.github/workflows/R-CMD-check-hard.yaml

@@ -29,7 +29,7 @@ jobs:
       # https://github.com/jgm/pandoc/releases
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/R-CMD-check-strict.yaml

@@ -38,7 +38,7 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/R-CMD-check.yaml

@@ -42,7 +42,7 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/check-link-rot.yaml

@@ -21,7 +21,7 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/check-random-test-order.yaml

@@ -18,7 +18,7 @@ jobs:
 
       - uses: r-lib/actions/setup-r@v2
         with:
-          r-version: "devel"
+          r-version: "release"
           use-public-rspm: true
 
       - uses: r-lib/actions/setup-r-dependencies@v2
@@ -34,7 +34,7 @@ jobs:
           library(cli)
           library(glue)
           library(testthat)
-          pkgload::load_all(".")
+          pkgload::load_all(".", quiet = TRUE)
           test_script_paths <- testthat::find_test_scripts("tests/testthat")
           seed <- sample.int(1e6, 1L)
           cli_inform("Chosen seed for the current test run: {seed}")

.github/workflows/check-readme.yaml

@@ -19,8 +19,8 @@ jobs:
       fail-fast: false
       matrix:
         config:
-          #- { os: ubuntu-latest, r: "release" }
-          - { os: ubuntu-latest, r: "devel" }
+          - { os: ubuntu-latest, r: "release" }
+          #- { os: ubuntu-latest, r: "devel" }
 
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
@@ -32,7 +32,7 @@ jobs:
       # https://github.com/jgm/pandoc/releases
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/check-spelling.yaml

@@ -21,7 +21,7 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/check-vignette-warnings.yaml

@@ -18,7 +18,7 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/pkgdown-no-suggests.yaml

@@ -27,7 +27,7 @@ jobs:
       # https://github.com/jgm/pandoc/releases
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:

.github/workflows/pkgdown.yaml

@@ -24,7 +24,7 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-          pandoc-version: "3.1.2"
+          pandoc-version: "3.1.6"
 
       - uses: r-lib/actions/setup-r@v2
         with:
@@ -48,7 +48,7 @@ jobs:
 
       - name: Deploy to GitHub pages 🚀
         if: github.event_name != 'pull_request'
-        uses: JamesIves/github-pages-deploy-action@v4.4.1
+        uses: JamesIves/github-pages-deploy-action@v4.4.3
         with:
           branch: gh-pages
           folder: docs