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Alan Christie
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- Note about rdkit and pipelines requirements in README
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README.md

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@@ -189,7 +189,17 @@ You will need:
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1. Ensure that you can execute both Python and Groovy from within the
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Git-Bash shell (i.e. `python --version` and `groovy --version` work)
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1. From the pipelines project root enter your Conda environment
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with something like `source activate my-conda-env`
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with something like `source activate my-conda-env`. To run the
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pipelines tests your environment must contain the rdkit package. It
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can be installed with this command from within Conda...
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$ conda install -c rdkit rdkit
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1. Install additional modules required by `pipelines-utils` but
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using its requirements file (which can be found in the `pipelines-utils`
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sub-project): -
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$ pip install -r requirements.txt
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With the above steps complete you should be able to execute the pipelines
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tester by navigating to the sub-module in your pipelines project: -

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