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1 parent 5968629 commit 32ac152Copy full SHA for 32ac152
src/nextflow/README.md
@@ -162,3 +162,8 @@ docker run -it --rm -v $PWD:$PWD:z -w $PWD -v /var/run/docker.sock:/var/run/dock
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```
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See [test-nextflow.sh](../..test-nextflow.sh) for some real examples.
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+
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+To debug in squonk move into the execution dir (/squonk/work/docker/<uuid>) and then execute:
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+```
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+docker run -it --rm -v $PWD:$PWD:z -w $PWD -v /var/run/docker.sock:/var/run/docker.sock informaticsmatters/nextflow-docker:0.30.2 ./execute
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