- Adds a simple deploy script

- Dynamic naming and initContainer in Job definition

Author: Alan Christie

deploy.sh

@@ -0,0 +1,12 @@
+#!/usr/bin/env bash
+
+# A simple deployment script for OpenShift.
+# It is assumed that your OpenShift Squonk application has been deployed
+# and that you are running this from the Squonk project/namespace
+# and have logged in as an appropriate user.
+
+set -e pipefail
+
+oc create -f post-service-descriptors.yaml
+
+echo "Squonk pipeline deployment is underway..."

post-service-descriptors.yaml

@@ -1,22 +1,24 @@
 ---
 
-# The OpenShift Job definition for the Pipelines SD-Loader image.
+# The OpenShift Job definition for the Squonk Pipelines SD-Loader image.
 # With Squonk running you can execute this in the Squonk project namespace
 # to enable the defined pipelines.
 #
 # oc create -f post-service-descriptors.yaml
-# oc delete job/pipelines-sdposter
 
 kind: Job
 apiVersion: batch/v1
 metadata:
-  name: pipelines-sd-poster
+  generateName: pipelines-sd-poster-
 spec:
   template:
-    metadata:
-      name: pipelines-sd-poster
     spec:
+      initContainers:
+      - image: yauritux/busybox-curl
+        name: wait-for-core-before-pipelines-post
+        command: ['sh', '-c',
+          'until (( curl http://coreservices:8080/rest/ping --connect-timeout 5 )); do sleep 2; done']
       containers:
-      - name: pipelines-sd-poster
-        image: squonk/rdkit-pipelines-sdposter:latest
+      - image: squonk/rdkit-pipelines-sdposter:latest
+        name: pipelines-sd-poster
       restartPolicy: Never