fixed param name

tdudgeon · tdudgeon · commit 9da6f710a252 · 2020-07-17T12:06:43.000+01:00
diff --git a/src/nextflow/xchem/tether-dock-score.nf b/src/nextflow/xchem/tether-dock-score.nf
@@ -141,6 +141,6 @@ process xcos {
     file 'XC_*.sdf'
 
     """
-    python -m pipelines.xchem.xcos -i '$part' -if sdf -f '$hits' -o 'XC_${part.name[0..-5]}' -of sdf --no-gzip
+    python -m pipelines.xchem.xcos -i '$part' -if sdf -f '$fragments' -o 'XC_${part.name[0..-5]}' -of sdf --no-gzip
     """
 }

Original file line number	Diff line number	Diff line change
`@@ -141,6 +141,6 @@ process xcos {`
`141`	`141`	`file 'XC_*.sdf'`
`142`	`142`
`143`	`143`	`"""`
`144`		`- python -m pipelines.xchem.xcos -i '$part' -if sdf -f '$hits' -o 'XC_${part.name[0..-5]}' -of sdf --no-gzip`
	`144`	`+ python -m pipelines.xchem.xcos -i '$part' -if sdf -f '$fragments' -o 'XC_${part.name[0..-5]}' -of sdf --no-gzip`
`145`	`145`	`"""`
`146`	`146`	`}`