added $PIN to target param

tdudgeon · tdudgeon · commit c1005f42521b · 2018-11-15T10:50:34.000Z
diff --git a/src/python/pipelines/rdkit/sucos.dsd.json b/src/python/pipelines/rdkit/sucos.dsd.json
@@ -75,5 +75,5 @@
     }
   ],
   "imageName": "informaticsmatters/rdkit_pipelines",
-  "command": "python -m pipelines.rdkit.sucos --target target.data.gz -i ${PIN}input.data.gz -o ${POUT}output -of json${binding.variables.containsKey('targetidx') ? ' --targetidx ' + binding.variables.get('targetidx') : ''} --meta"
+  "command": "python -m pipelines.rdkit.sucos --target ${PIN}target.data.gz -i ${PIN}input.data.gz -o ${POUT}output -of json${binding.variables.containsKey('targetidx') ? ' --targetidx ' + binding.variables.get('targetidx') : ''} --meta"
 }

Original file line number	Diff line number	Diff line change
`@@ -75,5 +75,5 @@`
`75`	`75`	`}`
`76`	`76`	`],`
`77`	`77`	`"imageName": "informaticsmatters/rdkit_pipelines",`
`78`		`- "command": "python -m pipelines.rdkit.sucos --target target.data.gz -i ${PIN}input.data.gz -o ${POUT}output -of json${binding.variables.containsKey('targetidx') ? ' --targetidx ' + binding.variables.get('targetidx') : ''} --meta"`
	`78`	`+ "command": "python -m pipelines.rdkit.sucos --target ${PIN}target.data.gz -i ${PIN}input.data.gz -o ${POUT}output -of json${binding.variables.containsKey('targetidx') ? ' --targetidx ' + binding.variables.get('targetidx') : ''} --meta"`
`79`	`79`	`}`