Prepare release v0.13

Author: w1th0utnam3

CHANGELOG.md

@@ -2,6 +2,10 @@
 
 The following changes are present in the `main` branch of the repository and are not yet part of a release:
 
+ - N/A
+
+## Version 0.13.0
+
  - Py: Major refactor of the Python bindings, interface is much simpler and more "pythonic"
    - Unified separate F64/F32 classes and functions and infer data type automatically
    - Nearly all inputs, outputs and attributes are now zero-copy (e.g. mesh vertices and faces can be accessed as attributes without copies)

CITATION.cff

@@ -21,5 +21,5 @@ abstract: >-
   Splashsurf is a surface reconstruction tool and framework
   for reconstructing surfaces from particle data.
 license: MIT
-version: 0.12.0
-date-released: '2025-06-25'
+version: 0.13.0
+date-released: '2025-09-02'

Cargo.lock

@@ -315,7 +315,7 @@ The file format is inferred from the extension of output filename.
 
 ### The `reconstruct` command
 ```
-splashsurf-reconstruct (v0.12.0) - Reconstruct a surface from particle data
+splashsurf-reconstruct (v0.13.0) - Reconstruct a surface from particle data
 
 Usage: splashsurf reconstruct [OPTIONS] --particle-radius <PARTICLE_RADIUS> --smoothing-length <SMOOTHING_LENGTH> --cube-size <CUBE_SIZE> <INPUT_FILE_OR_SEQUENCE>
 
@@ -356,7 +356,9 @@ Advanced parameters:
 
 Domain decomposition parameters:
       --subdomain-grid=<off|on>
-          Enable spatial decomposition using a regular grid-based approach (for efficient multithreading) [default: on] [possible values: off, on]
+          Enable automatic spatial decomposition using a regular grid-based approach (for efficient multithreading) if the domain is large enough [default: on] [possible values: off, on]
+      --subdomain-grid-auto-disable=<off|on>
+          Whether to automatically disable the spatial decomposition if the domain is too small [default: on] [possible values: off, on]
       --subdomain-cubes <SUBDOMAIN_CUBES>
           Each subdomain will be a cube consisting of this number of MC grid cells along each coordinate axis [default: 64]
 
@@ -429,7 +431,7 @@ Allows conversion between particle file formats and between mesh file formats. F
 is supported. For meshes only `VTK, PLY -> VTK, OBJ` is supported.
 
 ```
-splashsurf-convert (v0.11.0) - Convert particle or mesh files between different file formats
+splashsurf-convert (v0.13.0) - Convert particle or mesh files between different file formats
 
 Usage: splashsurf convert [OPTIONS] -o <OUTPUT_FILE>
 
@@ -454,7 +456,6 @@ Options:
           Print help
   -V, --version
           Print version
-
 ```
 
 ## Citation 

README.md

@@ -1,6 +1,6 @@
 [package]
 name = "pysplashsurf"
-version = "0.12.0"
+version = "0.13.0"
 edition = "2024"
 
 license.workspace = true

pysplashsurf/Cargo.toml

@@ -4,7 +4,7 @@ build-backend = "maturin"
 
 [project]
 name = "pysplashsurf"
-version = "0.12.0.2"
+version = "0.13.0.0"
 description = "Python bindings for splashsurf, a surface reconstruction library for SPH simulations."
 keywords = ["surface reconstruction", "marching cubes", "sph", "fluid", "particles", "mesh", "splashsurf", "splishsplash"]
 readme = "README.md"

pysplashsurf/pyproject.toml

@@ -1,6 +1,6 @@
 [package]
 name = "splashsurf"
-version = "0.12.0"
+version = "0.13.0"
 description = "Command-line tool for surface reconstruction of SPH particle data"
 keywords = ["sph", "particle", "surface", "reconstruction", "marching-cubes"]
 categories = ["command-line-utilities", "graphics", "science", "simulation", "visualization"]
@@ -13,20 +13,20 @@ homepage.workspace = true
 repository.workspace = true
 
 [dependencies]
-splashsurf_lib = { path = "../splashsurf_lib", version = "0.12.0", features = ["vtk_extras", "profiling", "io"] }
-clap = { version = "4.4", features = ["derive"] }
+splashsurf_lib = { path = "../splashsurf_lib", version = "0.13.0", features = ["vtk_extras", "profiling", "io"] }
+clap = { version = "4.5", features = ["derive"] }
 log = "0.4"
 fern = "0.7"
 chrono = "0.4.20"
 anyhow = "1.0"
 rayon = "1.7"
 bytemuck = "1.9"
-regex = "1.5.5"
+regex = "1.11"
 walkdir = "2"
 lexical-sort = "0.3"
 indicatif = "0.18"
 parking_lot = "0.12"
-once_cell = "1.18"
+once_cell = "1.21"
 
 [dev-dependencies]
 all_asserts = "2.3.3"