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ChenZiHong-GavinChenZiHong-Gavin
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feat: add github action (#14)
* feat: add github action * feat: update github actions * ci: test auto-update hf&ms * ci: update github actions * ci: test auto-update * ci: update github actions' * ci: test auto-update * ci: update github actions * ci: test auto-update * ci: test auto-update
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‎.github/workflows/sync_hf_ms.yml‎

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name: Sync to HF and ModelScope
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on:
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push:
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paths:
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- 'sft_model_eval/**'
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jobs:
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sync:
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runs-on: ubuntu-latest
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steps:
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- name: Checkout current repo
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uses: actions/checkout@v4
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with:
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lfs: true
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fetch-depth: 0
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- name: Setup Git and LFS
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run: |
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git config --global user.name "GitHub Action"
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git config --global user.email "[email protected]"
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git lfs install --skip-repo
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- name: Sync to HuggingFace
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env:
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HF_TOKEN: ${{ secrets.HF_TOKEN }}
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run: |
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GIT_LFS_SKIP_SMUDGE=1 git clone "https://oauth2:[email protected]/datasets/yj12869741/SeedBench" hf_repo
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cd hf_repo
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git config lfs.url "https://oauth2:[email protected]/datasets/yj12869741/SeedBench.git/info/lfs"
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rm -rf one-shot zero-shot
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cp -r ../sft_model_eval/one-shot ../sft_model_eval/zero-shot .
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if [ -z "$(git status --porcelain)" ]; then
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echo "No changes detected in HuggingFace repo"
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else
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echo "Changes detected, pushing to HuggingFace"
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git add .
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git commit -m "Update sft_model_eval from GitHub"
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git lfs push origin main
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git push origin main
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fi
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- name: Sync to ModelScope
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env:
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MODELSCOPE_TOKEN: ${{ secrets.MODELSCOPE_TOKEN }}
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run: |
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GIT_LFS_SKIP_SMUDGE=1 git clone "https://oauth2:[email protected]/datasets/y12869741/SeedBench.git" ms_repo
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cd ms_repo
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git config lfs.url "https://oauth2:[email protected]/datasets/y12869741/SeedBench.git/info/lfs"
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rm -rf one-shot zero-shot
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cp -r ../sft_model_eval/one-shot ../sft_model_eval/zero-shot .
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if [ -z "$(git status --porcelain)" ]; then
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echo "No changes detected in ModelScope repo"
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else
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echo "Changes detected, pushing to ModelScope"
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git add .
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git commit -m "Update sft_model_eval from GitHub"
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git lfs push origin master
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git push origin master
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fi

‎sft_model_eval/one-shot/1-2.json‎

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"question": "Gmzf_CCCHs主要参与哪些激素介导的信号通路？\nA. GA介导的信号通路\nB. JA介导的信号通路\nC. ABA介导的信号通路\nD. SA介导的信号通路",
19651965
"answer": "B, C",
19661966
"split": {
1967-
"level1": "GWAS",
1967+
"level1": "Gwas",
19681968
"level2": "Glycine max"
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},
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"task_type": "key_multiple_choice"
@@ -1974,7 +1974,7 @@
19741974
"question": "以下哪种性状在单一环境中具有最高的广义遗传力？\nA. 种子产量每株（SYP）\nB. 100粒种子重量（HSW）\nC. 根系长度\nD. 植株高度",
19751975
"answer": "B",
19761976
"split": {
1977-
"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_multiple_choice"
@@ -1984,7 +1984,7 @@
19841984
"question": "以下哪些性状在Chr.04的单倍型等位基因中表现出显著差异？\nA. 叶面积\nB. SPP（每荚种子数）\nC. PPP（每株荚数）\nD. 株高",
19851985
"answer": "B, C",
19861986
"split": {
1987-
"level1": "GWAS",
1987+
"level1": "Gwas",
19881988
"level2": "Glycine max"
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},
19901990
"task_type": "key_multiple_choice"
@@ -1994,7 +1994,7 @@
19941994
"question": "以下哪些基因在大豆根组织中表现出最高的表达水平？\nA. Glyma.09g051100\nB. Glyma.01g220600\nC. Glyma.05g225700\nD. Glyma.11g209100",
19951995
"answer": "D, A, B, C",
19961996
"split": {
1997-
"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_multiple_choice"
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"question": "MLM和FarmCPU模型在P值方面的表现如何？\nA. 产生的P值与预期P值相似\nB. 有效控制错误关联\nC. 产生的P值与预期P值不符\nD. 无法控制错误关联",
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"answer": "A, B",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Zea mays L."
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},
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"task_type": "key_multiple_choice"
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"question": "植物基因组中基因复制的常见类型包括哪些？\nA. 片段复制\nB. 逆转录复制\nC. 串联复制\nD. 单一基因复制",
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"answer": "C, A",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_multiple_choice"
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27942794
"question": "MCScanX工具用于分析什么？\nA. 基因复制\nB. 基因表达\nC. 基因突变\nD. 基因组测序",
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"answer": "A",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_multiple_choice"

‎sft_model_eval/one-shot/1-3.json‎

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"question": "在HY15环境中，与JP14相比，大豆种子的正常幼苗率（NSR）平均值________。",
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"answer": "较低",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_blank_fill"
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"question": "在HY15环境中，与JP14相比，大豆种子的电导率（EC）平均值________。",
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"answer": "较高",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_blank_fill"
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"question": "在多个环境和不同的GWAS模型中稳定检测到的SNP被称为________。",
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"answer": "稳定的多性状关联（MTAs）",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_blank_fill"
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23442344
"question": "SNP AX-93793,210 是使用四种不同的GWAS模型识别的，这些模型包括________。",
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"answer": "BLINK, FarmCPU, GLM, 和 MLMM",
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"split": {
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"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Glycine max"
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},
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"task_type": "key_blank_fill"
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"question": "GRMZM2G016477基因被预测编码为一种富含亮氨酸重复的________。 ",
35053505
"answer": "受体样蛋白激酶",
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"split": {
3507-
"level1": "GWAS",
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"level1": "Gwas",
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"level2": "Zea mays L."
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},
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"task_type": "key_blank_fill"
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35143514
"question": "被识别为根分枝负调控因子的两个基因是________和________。",
35153515
"answer": "Zm00001d050783，Zm00001d017751",
35163516
"split": {
3517-
"level1": "GWAS",
3517+
"level1": "Gwas",
35183518
"level2": "Zea mays L."
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},
35203520
"task_type": "key_blank_fill"
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35243524
"question": "在种子萌发过程中，Zm00001d003657 的表达模式是________。",
35253525
"answer": "下调",
35263526
"split": {
3527-
"level1": "GWAS",
3527+
"level1": "Gwas",
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"level2": "Zea mays L."
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},
35303530
"task_type": "key_blank_fill"
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35343534
"question": "Zm00001d029793 编码的是一种________。",
35353535
"answer": "glutathione S-transferase F9",
35363536
"split": {
3537-
"level1": "GWAS",
3537+
"level1": "Gwas",
35383538
"level2": "Zea mays L."
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},
35403540
"task_type": "key_blank_fill"
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35443544
"question": "在 SCL326 中，Zm00001d017932 在种子萌发期间的表达是________。",
35453545
"answer": "上调",
35463546
"split": {
3547-
"level1": "GWAS",
3547+
"level1": "Gwas",
35483548
"level2": "Zea mays L."
35493549
},
35503550
"task_type": "key_blank_fill"
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40544054
"question": "大多数Gmzf_CCCH基因（116个中的104个）定位于________。 ",
40554055
"answer": "细胞核",
40564056
"split": {
4057-
"level1": "GWAS",
4057+
"level1": "Gwas",
40584058
"level2": "Glycine max"
40594059
},
40604060
"task_type": "key_blank_fill"
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40644064
"question": "Branch Number (BN) 受________和________的影响。 ",
40654065
"answer": "G, G × E",
40664066
"split": {
4067-
"level1": "GWAS",
4067+
"level1": "Gwas",
40684068
"level2": "Glycine max"
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},
40704070
"task_type": "key_blank_fill"
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40744074
"question": "显著的SNP（AX-93793,210）位于________号染色体上。",
40754075
"answer": "11",
40764076
"split": {
4077-
"level1": "GWAS",
4077+
"level1": "Gwas",
40784078
"level2": "Glycine max"
40794079
},
40804080
"task_type": "key_blank_fill"
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40844084
"question": "极度敏感的大豆种质在碱性处理下与对照组相比，________显著减少。",
40854085
"answer": "地上部分和根部生物量",
40864086
"split": {
4087-
"level1": "GWAS",
4087+
"level1": "Gwas",
40884088
"level2": "Glycine max"
40894089
},
40904090
"task_type": "key_blank_fill"
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40944094
"question": "在对357个大豆地方品种进行分组时，使用了________算法来根据相似性进行分组。 ",
40954095
"answer": "K-means聚类",
40964096
"split": {
4097-
"level1": "GWAS",
4097+
"level1": "Gwas",
40984098
"level2": "Glycine max"
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},
41004100
"task_type": "key_blank_fill"
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41044104
"question": "在识别出的三个组中，组I包含________个地方品种。 ",
41054105
"answer": "92",
41064106
"split": {
4107-
"level1": "GWAS",
4107+
"level1": "Gwas",
41084108
"level2": "Glycine max"
41094109
},
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"task_type": "key_blank_fill"

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