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Merge pull request #1 from xhan97/develop
First release
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‎.coveragerc‎

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[run]
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branch = True
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source = IsoML
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include = */IsoML/*
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source = pyikt
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include = */pyikt/*

‎.gitattributes‎

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# GitHub syntax highlighting
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pixi.lock linguist-language=YAML linguist-generated=true
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# SCM syntax highlighting
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pixi.lock linguist-language=YAML linguist-generated=true

‎.github/workflows/deploy-gh-pages.yml‎

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uses: peaceiris/[email protected]
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with:
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github_token: ${{ secrets.GITHUB_TOKEN }}
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publish_dir: ./doc/_build/html
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publish_dir: ./site
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commit_message: "[ci skip] ${{ github.event.head_commit.message }}"

‎.github/workflows/pypi.yml‎

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name: pypi
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on:
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workflow_dispatch:
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push:
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tags:
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- "*"
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jobs:
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build_linux_wheels:
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name: Build ${{ matrix.linux_tag }} wheels with cp${{ matrix.python-version }}
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runs-on: ubuntu-latest
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strategy:
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matrix:
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linux_tag: ["manylinux", "musllinux"]
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python-version: ["310", "311", "312", "313"]
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steps:
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- uses: actions/checkout@v4
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v3
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with:
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platforms: all
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- name: Build wheels
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uses: pypa/[email protected]
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timeout-minutes: 720
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env:
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CIBW_BUILD: "cp${{ matrix.python-version }}-${{ matrix.linux_tag }}_*"
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CIBW_ARCHS_LINUX: "x86_64 i686 aarch64"
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CIBW_SKIP: "*-musllinux_i686"
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CIBW_MANYLINUX_X86_64_IMAGE: "manylinux2014"
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CIBW_MANYLINUX_I686_IMAGE: "manylinux2014"
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CIBW_MANYLINUX_AARCH64_IMAGE: "manylinux2014"
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CIBW_MUSLLINUX_X86_64_IMAGE: "musllinux_1_1"
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CIBW_MUSLLINUX_I686_IMAGE: "musllinux_1_1"
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CIBW_MUSLLINUX_AARCH64_IMAGE: "musllinux_1_1"
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CIBW_ENVIRONMENT: 'PATH="$HOME/.cargo/bin:$PATH"'
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CIBW_ENVIRONMENT_LINUX: 'PATH="$HOME/.cargo/bin:$PATH" CARGO_NET_GIT_FETCH_WITH_CLI="true"'
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CIBW_BEFORE_BUILD: >
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rustup default nightly &&
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rustup show
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CIBW_BEFORE_BUILD_LINUX: >
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curl https://sh.rustup.rs -sSf | sh -s -- --default-toolchain=nightly --profile=minimal -y &&
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rustup show
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- uses: actions/upload-artifact@v4
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with:
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name: artifact-${{ matrix.linux_tag }}-cp${{ matrix.python-version }}
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path: ./wheelhouse/*.whl
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build_macos_wheels:
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name: Build wheels on ${{ matrix.os }}
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runs-on: ${{ matrix.os }}
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strategy:
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matrix:
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os: [macos-13, macos-14]
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steps:
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- uses: actions/checkout@v4
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- name: Set up rust
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uses: dtolnay/rust-toolchain@stable
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with:
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toolchain: nightly
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- run: rustup target add aarch64-apple-darwin && rustup target add x86_64-apple-darwin
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- name: Build wheels
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uses: pypa/[email protected]
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timeout-minutes: 720
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env:
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CIBW_BUILD: "cp310-* cp311-* cp312-* cp313-*"
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CIBW_ARCHS_MACOS: "universal2"
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# arm64 and universal2 wheels are tagged with x86_64 because there's an issue with Poetry
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# More information here: https://cibuildwheel.readthedocs.io/en/stable/faq/#how-to-cross-compile (CTRL + F "poetry")
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# https://github.com/pypa/cibuildwheel/issues/1415
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CIBW_REPAIR_WHEEL_COMMAND_MACOS: >
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ls {dest_dir} &&
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delocate-wheel --require-archs {delocate_archs} -w {dest_dir} -v {wheel} &&
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for file in {dest_dir}/*.whl ; do mv $file ${file//x86_64/universal2} ; done
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CIBW_ENVIRONMENT: 'PATH="$HOME/.cargo/bin:$PATH"'
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CIBW_BEFORE_BUILD: >
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rustup default nightly &&
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rustup show
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- uses: actions/upload-artifact@v4
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with:
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name: artifact-${{ matrix.os }}
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path: ./wheelhouse/*.whl
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build_windows_wheels:
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name: Build wheels on ${{ matrix.os }}
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runs-on: ${{ matrix.os }}
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strategy:
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matrix:
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os: [windows-2019, windows-2022]
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steps:
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- uses: actions/checkout@v4
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- name: Set up rust
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uses: dtolnay/rust-toolchain@stable
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with:
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toolchain: nightly
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- run: rustup toolchain install stable-i686-pc-windows-msvc
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- run: rustup target add i686-pc-windows-msvc
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- name: Build wheels
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uses: pypa/[email protected]
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timeout-minutes: 720
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env:
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CIBW_BUILD: "cp310-* cp311-* cp312-* cp313-*"
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CIBW_ARCHS_WINDOWS: "AMD64 x86"
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CIBW_ENVIRONMENT: 'PATH="$HOME/.cargo/bin:$PATH"'
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CIBW_ENVIRONMENT_WINDOWS: 'PATH="$UserProfile\.cargo\bin;$PATH"'
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CIBW_BEFORE_BUILD: >
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rustup default nightly &&
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rustup show
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- uses: actions/upload-artifact@v4
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with:
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name: artifact-${{ matrix.os }}
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path: ./wheelhouse/*.whl
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build_sdist:
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name: Build source distribution
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# Can't use more than 12 jobs in parallel
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needs: [build_macos_wheels]
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- name: Build River
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uses: ./.github/actions/install-env
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with:
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python-version: "3.13"
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- name: Build dist
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run: poetry build
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- uses: actions/upload-artifact@v4
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with:
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name: artifact-sdist
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path: dist/*.tar.gz
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merge_artifacts:
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runs-on: ubuntu-latest
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needs: [build_linux_wheels, build_macos_wheels, build_windows_wheels, build_sdist]
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steps:
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- name: Merge Artifacts
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uses: actions/upload-artifact/merge@v4
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with:
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name: artifact
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pattern: artifact-*
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upload_pypi:
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needs: merge_artifacts
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runs-on: ubuntu-latest
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steps:
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- uses: actions/[email protected]
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with:
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name: artifact
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path: dist
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- uses: pypa/[email protected]
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with:
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user: __token__
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password: ${{ secrets.PYPI_API_TOKEN }}

‎.github/workflows/python-app.yml‎

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uses: codecov/[email protected]
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with:
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token: ${{ secrets.CODECOV_TOKEN }}
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slug: IsolationKernel/IsoML
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slug: IsolationKernel/pyikt

‎.gitignore‎

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# VsCode
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.vscode/
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# test
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env.ps1
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env.sh
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origin_data/
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myx_test/
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# pixi environments
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.pixi
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*.egg-info

‎IsoML/__init__.py‎

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