2025-03-14 1.2.1: fixed bug of TRAV/DV not being counted as TRD (closes #45)

Author: JamieHeather

setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = stitchr
-version = 1.2.0
+version = 1.2.1
 author = Jamie Heather
 author_email = jheather@mgh.harvard.edu
 description = Stitch together coding TCR sequences from V/J/CDR3 information

src/Stitchr/stitchr.py

@@ -15,7 +15,7 @@
 import warnings
 
 
-__version__ = '1.2.0'
+__version__ = '1.2.1'
 __author__ = 'Jamie Heather'
 __email__ = 'jheather@mgh.harvard.edu'
 

src/Stitchr/stitchrfunctions.py

@@ -22,7 +22,7 @@
 else:
     import importlib.resources as importlib_resources       # importlib.resources
 
-__version__ = '1.4.1'
+__version__ = '1.4.2'
 __author__ = 'Jamie Heather'
 __email__ = 'jheather@mgh.harvard.edu'
 
@@ -136,7 +136,7 @@ def get_chain(v, j):
         return 'TRA'
     elif v.startswith('TRG') and j.startswith('TRG'):
         return 'TRG'
-    elif v.startswith('TRD') and j.startswith('TRD'):
+    elif (v.startswith('TRA') or v.startswith('TRD')) and j.startswith('TRD'):
         return 'TRD'
 
     elif v.startswith('IGH') and j.startswith('IGH'):