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update changelog
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CHANGELOG.md

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@@ -5,4 +5,13 @@ All notable changes to this project will be documented in this file.
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
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and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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## [Unreleased]
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## [v1.0.0] – 2025-04-29
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### Added
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- Support for parsing genome annotations in **GFF** format and protein sequences in **FAA** format.
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- TA annotation of CDS using **pyhmmer** and curated **HMM profiles**.
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- Grouping of CDS hits into putative **toxin-antitoxin systems** based on genomic proximity.
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- Export of annotated CDS hits and metadata to a **TSV file**.
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- Command-line interface (**CLI**) with arguments for input files, thresholds, and output configuration.

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