support py311 only

Author: Jhsmit

.github/workflows/pytest.yml

@@ -9,7 +9,7 @@ jobs:
       fail-fast: false
       matrix:
         os: [ "ubuntu-latest", "macos-latest", "windows-latest"]
-        python-version: [ "3.11", "3.12" ]
+        python-version: [ "3.11", ]
 
     runs-on: ${{ matrix.os }}
     steps:

pyproject.toml

@@ -14,10 +14,9 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "Natural Language :: English",
     "Programming Language :: Python :: 3.11",
-    "Programming Language :: Python :: 3.12",
 ]
 
-requires-python = ">=3.11,<3.13"
+requires-python = ">=3.11,<3.12"
 dependencies = [
     "torch",
     "hdxrate",

tests/test_models.py

@@ -6,10 +6,10 @@
 from pandas.testing import assert_frame_equal
 
 from pyhdx import HDXMeasurement
-from pyhdx.datasets import read_dynamx
-from pyhdx.fileIO import csv_to_dataframe, csv_to_hdxm
+from pyhdx.fileIO import csv_to_dataframe, csv_to_hdxm, read_dynamx
 from pyhdx.models import Coverage
-from pyhdx.process import apply_control, correct_d_uptake, filter_peptides
+from pyhdx.process import apply_control, correct_d_uptake
+from pyhdx.legacy import filter_peptides
 
 cwd = Path(__file__).parent
 input_dir = cwd / "test_data" / "input"