v1.1.0 prep (#38)

* add change log entry for #35

* resolve #25

* bump to v1.1.0

* fix up

* remove old codecov.yml

* explicitly list source dirs in .coveragerc

* more settings in .coveragerc

* add pypi badge

Author: JoshKarpel

.coveragerc

@@ -1,7 +1,13 @@
 [run]
+
+source =
+    idesolver
+    tests
+
 branch = True
 
 [report]
+
 exclude_lines =
     pragma: no cover
     pragma: unreachable
@@ -12,3 +18,6 @@ exclude_lines =
     if 0:
     if False:
     if __name__ == .__main__.:
+
+skip_empty = True
+show_missing = True

README.rst

@@ -7,6 +7,8 @@ idesolver
 .. image:: https://readthedocs.org/projects/idesolver/badge/?version=latest
     :target: https://idesolver.readthedocs.io/en/latest/?badge=latest
 
+.. image:: https://img.shields.io/pypi/v/idesolver   :alt: PyPI
+
 .. image:: https://codecov.io/gh/JoshKarpel/idesolver/branch/master/graph/badge.svg
     :target: https://codecov.io/gh/JoshKarpel/idesolver
 

codecov.yml

@@ -3,6 +3,10 @@ Change Log
 
 .. currentmodule:: idesolver
 
+v1.1.0
+------
+* Add support for multidimensional IDEs (PR :pr:`35` resolves :issue:`28`, thanks `nbrucy <https://github.com/nbrucy>`_!)
+
 v1.0.5
 ------
 * Relaxes dependency version restrictions in advance of changes to ``pip``.

docs/source/changelog.rst

@@ -43,6 +43,7 @@
     "sphinx.ext.githubpages",
     "sphinx.ext.napoleon",
     "sphinx_rtd_theme",
+    "sphinx_issues",
 ]
 
 # Add any paths that contain templates here, relative to this directory.
@@ -210,3 +211,6 @@
 
 autodoc_member_order = "bysource"
 autoclass_content = "both"
+
+# sphinx-issues config
+issues_github_path = "JoshKarpel/idesolver"

docs/source/conf.py

@@ -84,15 +84,19 @@ class IDESolver:
     Attributes
     ----------
     x : :class:`numpy.ndarray`
-        The positions where the solution is calculated (i.e., where `y` is evaluated).
+        The positions where the solution is calculated (i.e., where :math:`y` is evaluated).
     y : :class:`numpy.ndarray`
-        The solution :math:`y(x)`. ``None`` until :meth:`IDESolver.solve` is finished.
+        The solution :math:`y(x)`.
+        ``None`` until :meth:`IDESolver.solve` is finished.
     global_error : :class:`float`
-        The final global error estimate. ``None`` until :meth:`IDESolver.solve` is finished.
+        The final global error estimate.
+        ``None`` until :meth:`IDESolver.solve` is finished.
     iteration : :class:`int`
-        The current iteration. ``None`` until :meth:`IDESolver.solve` starts.
+        The current iteration.
+        ``None`` until :meth:`IDESolver.solve` starts.
     y_intermediate :
-        The intermediate solutions. Only exists if `store_intermediate_y` is ``True``.
+        The intermediate solutions.
+        Only exists if ``store_intermediate_y`` is ``True``.
 
     """
 
@@ -122,31 +126,40 @@ def __init__(
         Parameters
         ----------
         x : :class:`numpy.ndarray`
-            The array of :math:`x` values to find the solution :math:`y(x)` at. Generally something like ``numpy.linspace(a, b, num_pts)``.
+            The array of :math:`x` values to find the solution :math:`y(x)` at.
+            Generally something like ``numpy.linspace(a, b, num_pts)``.
         y_0 : :class:`float` or :class:`complex` or  :class:`numpy.ndarray`
             The initial condition, :math:`y_0 = y(a)` (can be multidimensional).
         c :
             The function :math:`c(y, x)`.
+            Defaults to :math:`c(y, x) = 0`.
         d :
             The function :math:`d(x)`.
+            Defaults to :math:`d(x) = 1`.
         k :
             The kernel function :math:`k(x, s)`.
+            Defaults to :math:`k(x, s) = 1`.
         f :
             The function :math:`F(y)`.
+            Defaults to :math:`f(y) = 0`.
         lower_bound :
             The lower bound function :math:`\\alpha(x)`.
+            Defaults to the first element of ``x``.
         upper_bound :
             The upper bound function :math:`\\beta(x)`.
+            Defaults to the last element of ``x``.
         global_error_tolerance : :class:`float`
             The algorithm will continue until the global errors goes below this or uses more than `max_iterations` iterations. If ``None``, the algorithm continues until hitting `max_iterations`.
         max_iterations : :class:`int`
             The maximum number of iterations to use. If ``None``, iteration will not stop unless the `global_error_tolerance` is satisfied. Defaults to ``None``.
         ode_method : :class:`str`
             The ODE solution method to use. As the `method` option of :func:`scipy.integrate.solve_ivp`. Defaults to ``'RK45'``, which is good for non-stiff systems.
         ode_atol : :class:`float`
-            The absolute tolerance for the ODE solver. As the `atol` argument of :func:`scipy.integrate.solve_ivp`.
+            The absolute tolerance for the ODE solver.
+            As the `atol` argument of :func:`scipy.integrate.solve_ivp`.
         ode_rtol : :class:`float`
-            The relative tolerance for the ODE solver. As the `rtol` argument of :func:`scipy.integrate.solve_ivp`.
+            The relative tolerance for the ODE solver.
+            As the `rtol` argument of :func:`scipy.integrate.solve_ivp`.
         int_atol : :class:`float`
             The absolute tolerance for the integration routine. As the `epsabs` argument of :func:`scipy.integrate.quad`.
         int_rtol : :class:`float`

idesolver/idesolver.py

@@ -1,6 +1,6 @@
 [metadata]
 name = idesolver
-version = 1.0.5
+version = 1.1.0
 description = A general purpose iterative numeric integro-differential equation (IDE) solver
 long_description = file: README.rst
 long_description_content_type = text/x-rst
@@ -36,6 +36,7 @@ python_requires = >=3.6
 [options.extras_require]
 docs =
     sphinx
+    sphinx-issues
     sphinx_autodoc_typehints
     sphinx_rtd_theme
 tests =