Errors on plotting Pyramid #64
Description
I am plotting a Pyramid that has some Union{Missing, Float32} element type and at some point I get huge error messages like the one below in the terminal and the figure stops responding.
I am not sure, what is the underlying issue.
julia> ┌ Warning: error in rectangle zoom
│ exception =
│ MethodError: Cannot `convert` an object of type Missing to an object of type Float32
│ The function `convert` exists, but no method is defined for this combination of argument types.
│
│ Closest candidates are:
│ convert(::Type{T}, ::IntervalArithmetic.ExactReal) where T<:Real
│ @ IntervalArithmetic ~/.julia/packages/IntervalArithmetic/GSwKs/src/intervals/exact_literals.jl:118
│ convert(::Type{T}, ::AbstractChar) where T<:Number
│ @ Base char.jl:185
│ convert(::Type{T}, ::T) where T
│ @ Base Base.jl:126
│ ...
│
│ Stacktrace:
│ [1] setindex!(A::Memory{Float32}, x::Missing, i1::Int64)
│ @ Base ./genericmemory.jl:243
│ [2] unsafe_copyto!(dest::Memory{Float32}, doffs::Int64, src::Memory{Union{Missing, Float32}}, soffs::Int64, n::Int64)
│ @ Base ./genericmemory.jl:153
│ [3] unsafe_copyto!
│ @ ./genericmemory.jl:133 [inlined]
│ [4] _copyto_impl!
│ @ ./array.jl:308 [inlined]
│ [5] copyto!
│ @ ./array.jl:294 [inlined]
│ [6] copyto!
│ @ ./array.jl:319 [inlined]
│ [7] copyto_axcheck!
│ @ ./abstractarray.jl:1167 [inlined]
│ [8] Matrix{Float32}(x::Matrix{Union{Missing, Float32}})
│ @ Base ./array.jl:626
│ [9] convert
│ @ ./array.jl:618 [inlined]
│ [10] cvt1
│ @ ./essentials.jl:612 [inlined]
│ [11] ntuple
│ @ ./ntuple.jl:50 [inlined]
│ [12] convert(::Type{Tuple{Vector{Float64}, Vector{Float64}, Matrix{Float32}}}, x::Tuple{Vector{Float64}, Vector{Float64}, Matrix{Union{Missing, Float32}}})
│ @ Base ./essentials.jl:614
│ [13] setproperty!(x::Observable{Tuple{Vector{Float64}, Vector{Float64}, Matrix{Float32}}}, f::Symbol, v::Tuple{Vector{Float64}, Vector{Float64}, Matrix{Union{Missing, Float32}}})
│ @ Base ./Base.jl:52
│ [14] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:122
│ [15] (::Observables.MapCallback)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:436
│ [16] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [17] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [18] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [19] (::PyramidSchemeMakieExt.var"#3#5"{Axis, Pyramid{Union{Missing, Float32}, 2, Tuple{X{DimensionalData.Dimensions.Lookups.Sampled{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, DimensionalData.Dimensions.Lookups.ForwardOrdered, DimensionalData.Dimensions.Lookups.Regular{Float64}, DimensionalData.Dimensions.Lookups.Points, DimensionalData.Dimensions.Lookups.NoMetadata}}, Y{DimensionalData.Dimensions.Lookups.Sampled{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, DimensionalData.Dimensions.Lookups.ReverseOrdered, DimensionalData.Dimensions.Lookups.Regular{Float64}, DimensionalData.Dimensions.Lookups.Points, DimensionalData.Dimensions.Lookups.NoMetadata}}}, DiskArrays.BroadcastDiskArray{Union{Missing, Float32}, 2, Base.Broadcast.Broadcasted{DiskArrays.ChunkStyle{2}, Nothing, typeof(*), Tuple{DiskArrayTools.CFDiskArray{Union{Missing, Float32}, 2, Float32, ZArray{Float32, 2, Zarr.BloscCompressor, DirectoryStore}, Float32}, DiskArrayTools.CFDiskArray{Union{Missing, Int8}, 2, Int8, NetCDFExt.NetCDFVariable{Int8, 2}, Int8}}}}, YAXArray{Union{Missing, Float32}, 2, DiskArrays.BroadcastDiskArray{Union{Missing, Float32}, 2, Base.Broadcast.Broadcasted{DiskArrays.ChunkStyle{2}, Nothing, typeof(*), Tuple{DiskArrayTools.CFDiskArray{Union{Missing, Float32}, 2, Float32, ZArray{Float32, 2, Zarr.BloscCompressor, DirectoryStore}, Float32}, DiskArrayTools.CFDiskArray{Union{Missing, Int8}, 2, Int8, NetCDFExt.NetCDFVariable{Int8, 2}, Int8}}}}, Tuple{X{DimensionalData.Dimensions.Lookups.Sampled{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, DimensionalData.Dimensions.Lookups.ForwardOrdered, DimensionalData.Dimensions.Lookups.Regular{Float64}, DimensionalData.Dimensions.Lookups.Points, DimensionalData.Dimensions.Lookups.NoMetadata}}, Y{DimensionalData.Dimensions.Lookups.Sampled{Float64, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, DimensionalData.Dimensions.Lookups.ReverseOrdered, DimensionalData.Dimensions.Lookups.Regular{Float64}, DimensionalData.Dimensions.Lookups.Points, DimensionalData.Dimensions.Lookups.NoMetadata}}}, Dict{String, Any}}, Vector{AbstractDimMatrix}, Dict{Any, Any}}, Extents.Extent{(:X, :Y), Tuple{Tuple{Float64, Float64}, Tuple{Float64, Float64}}}, Observable{AbstractDimMatrix}})(viewport::GeometryBasics.HyperRectangle{2, Int64})
│ @ PyramidSchemeMakieExt ~/.julia/packages/PyramidScheme/REMDs/ext/PyramidSchemeMakieExt.jl:44
│ [20] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [21] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [22] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [23] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [24] (::Observables.MapCallback)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:436
│ [25] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [26] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [27] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [28] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [29] update_computedbbox!(computedbbox::Observable{GeometryBasics.HyperRectangle{2, Float32}}, suggestedbbox::GeometryBasics.HyperRectangle{2, Float32}, alignment::Tuple{Float32, Float32}, reporteddimensions::GridLayoutBase.Dimensions, alignmode::Inside, protrusions::GridLayoutBase.RectSides{Float32}, sizeattrs::Observable{Tuple{Union{Nothing, Float32, Auto, Fixed, Relative}, Union{Nothing, Float32, Auto, Fixed, Relative}}}, autosizeobservable::Observable{Tuple{Union{Nothing, Float32}, Union{Nothing, Float32}}})
│ @ GridLayoutBase ~/.julia/packages/GridLayoutBase/xvxWi/src/layoutobservables.jl:356
│ [30] (::GridLayoutBase.var"#106#108"{Observable{GridLayoutBase.Dimensions}, Observable{Tuple{Union{Nothing, Float32, Auto, Fixed, Relative}, Union{Nothing, Float32, Auto, Fixed, Relative}}}, Observable{Tuple{Union{Nothing, Float32}, Union{Nothing, Float32}}}, Observable{Any}, Observable{GridLayoutBase.RectSides{Float32}}, Observable{GeometryBasics.HyperRectangle{2, Float32}}})(sbbox::GeometryBasics.HyperRectangle{2, Float32}, ali::Tuple{Float32, Float32})
│ @ GridLayoutBase ~/.julia/packages/GridLayoutBase/xvxWi/src/layoutobservables.jl:218
│ [31] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{})
│ @ Base ./essentials.jl:1055
│ [32] invokelatest(::Any, ::Any, ::Vararg{Any})
│ @ Base ./essentials.jl:1052
│ [33] (::Observables.OnAny)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:420
│ [34] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [35] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [36] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [37] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [38] align_to_bbox!(gl::GridLayout, suggestedbbox::GeometryBasics.HyperRectangle{2, Float32})
│ @ GridLayoutBase ~/.julia/packages/GridLayoutBase/xvxWi/src/gridlayout.jl:1096
│ [39] (::GridLayoutBase.var"#11#12"{GridLayout})(bbox::GeometryBasics.HyperRectangle{2, Float32})
│ @ GridLayoutBase ~/.julia/packages/GridLayoutBase/xvxWi/src/gridlayout.jl:158
│ [40] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [41] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [42] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [43] update!(gl::GridLayout)
│ @ GridLayoutBase ~/.julia/packages/GridLayoutBase/xvxWi/src/gridlayout.jl:193
│ [44] update!
│ @ ~/.julia/packages/GridLayoutBase/xvxWi/src/gridlayout.jl:1525 [inlined]
│ [45] (::GridLayoutBase.var"#14#15"{GridLayoutBase.GridContent{GridLayout}, Axis})(c::GridLayoutBase.Dimensions)
│ @ GridLayoutBase ~/.julia/packages/GridLayoutBase/xvxWi/src/gridlayout.jl:261
│ [46] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [47] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [48] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [49] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [50] (::Observables.MapCallback)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:436
│ --- the above 5 lines are repeated 2 more times ---
│ [61] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [62] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [63] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [64] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [65] (::Makie.var"#1610#1624"{Observable{Any}})(idealspace::Float32, space::MakieCore.Automatic)
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/lineaxis.jl:331
│ [66] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{})
│ @ Base ./essentials.jl:1055
│ [67] invokelatest(::Any, ::Any, ::Vararg{Any})
│ @ Base ./essentials.jl:1052
│ [68] (::Observables.OnAny)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:420
│ [69] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [70] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [71] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [72] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [73] (::Observables.MapCallback)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:436
│ [74] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [75] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [76] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [77] update_ticklabel_node(closure_args::Tuple{Observable{Bool}, Observable{Any}, Observable{Float32}, Observable{Any}, Observable{Vector{Float64}}}, ticklabel_annotation_obs::Observable{Vector{Tuple{Any, Point{2, Float32}}}}, labelgap::Float32, flipped::Bool, tickpositions::Vector{Point{2, Float32}}, tickstrings::Vector{Any})
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/lineaxis.jl:168
│ [78] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{})
│ @ Base ./essentials.jl:1055
│ [79] invokelatest(::Any, ::Any, ::Vararg{Any})
│ @ Base ./essentials.jl:1052
│ [80] (::Observables.OnAny)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:420
│ [81] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [82] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [83] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [84] setindex!
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123 [inlined]
│ [85] update_tickpos_string(closure_args::Tuple{Observable{Vector{Any}}, Observable{Vector{Point{2, Float32}}}, Observable{Vector{Float64}}, Observable{Tuple{Float32, Tuple{Float32, Float32}, Bool}}, Observable{Tuple{Float64, Float64}}}, tickvalues_labels_unfiltered::Tuple{Vector{Float64}, Vector{Any}}, reversed::Bool, scale::typeof(identity))
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/lineaxis.jl:232
│ [86] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{})
│ @ Base ./essentials.jl:1055
│ [87] invokelatest(::Any, ::Any, ::Vararg{Any})
│ @ Base ./essentials.jl:1052
│ [88] (::Observables.OnAny)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:420
│ [89] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [90] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [91] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [92] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [93] (::Observables.MapCallback)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:436
│ --- the above 5 lines are repeated 1 more time ---
│ [99] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [100] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [101] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [102] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [103] (::Observables.SetindexCallback)(x::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:148
│ [104] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [105] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [106] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [107] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [108] (::Observables.MapCallback)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:436
│ [109] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [110] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [111] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [112] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [113] adjustlimits!(la::Axis)
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/blocks/axis.jl:995
│ [114] (::Makie.var"#1681#1712"{Axis})(pxa::GeometryBasics.HyperRectangle{2, Int64}, lims::GeometryBasics.HyperRectangle{2, Float64})
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/blocks/axis.jl:508
│ [115] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{})
│ @ Base ./essentials.jl:1055
│ [116] invokelatest(::Any, ::Any, ::Vararg{Any})
│ @ Base ./essentials.jl:1052
│ [117] (::Observables.OnAny)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:420
│ [118] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [119] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [120] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [121] setindex!(observable::Observable, val::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123
│ [122] (::Makie.var"#1543#1544"{Axis})(newlims::GeometryBasics.HyperRectangle{2, Float64})
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/types.jl:703
│ [123] process_interaction(r::Makie.RectangleZoom, event::MouseEvent, ax::Axis)
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/interactions.jl:181
│ [124] process_axis_event(ax::Axis, event::MouseEvent)
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/blocks/axis.jl:16
│ [125] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{})
│ @ Base ./essentials.jl:1055
│ [126] invokelatest(::Any, ::Any, ::Vararg{Any})
│ @ Base ./essentials.jl:1052
│ [127] (::Observables.OnAny)(value::Any)
│ @ Observables ~/.julia/packages/Observables/YdEbO/src/Observables.jl:420
│ [128] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [129] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [130] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [131] setindex!
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123 [inlined]
│ [132] (::Makie.var"#1535#1537"{Scene, Base.RefValue{Bool}, Base.RefValue{Union{Nothing, Makie.Mouse.Button}}, Base.RefValue{Float64}, Base.RefValue{Float64}, Base.RefValue{Bool}, Base.RefValue{Point{2, Float64}}, Base.RefValue{Bool}, Base.RefValue{Union{Nothing, Makie.Mouse.Button}}, Base.RefValue{Bool}, Base.RefValue{Point{2, Float32}}, Base.RefValue{Vec{2, Float64}}, Base.RefValue{Makie.Mouse.Action}, Observable{MouseEvent}, Float64, Module})(event::Makie.MouseButtonEvent)
│ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/mousestatemachine.jl:327
│ [133] #invokelatest#2
│ @ ./essentials.jl:1055 [inlined]
│ [134] invokelatest
│ @ ./essentials.jl:1052 [inlined]
│ [135] notify
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined]
│ [136] setindex!
│ @ ~/.julia/packages/Observables/YdEbO/src/Observables.jl:123 [inlined]
│ [137] (::GLMakie.var"#mousebuttons#170"{Observable{Makie.MouseButtonEvent}})(window::GLFW.Window, button::GLFW.MouseButton, action::GLFW.Action, mods::Int32)
│ @ GLMakie ~/.julia/packages/GLMakie/TH3rf/src/events.jl:104
│ [138] _MouseButtonCallbackWrapper(window::GLFW.Window, button::GLFW.MouseButton, action::GLFW.Action, mods::Int32)
│ @ GLFW ~/.julia/packages/GLFW/wmoTL/src/callback.jl:43
│ [139] PollEvents
│ @ ~/.julia/packages/GLFW/wmoTL/src/glfw3.jl:702 [inlined]
│ [140] pollevents(screen::GLMakie.Screen{GLFW.Window}, frame_state::Makie.TickState)
│ @ GLMakie ~/.julia/packages/GLMakie/TH3rf/src/screen.jl:485
│ [141] on_demand_renderloop(screen::GLMakie.Screen{GLFW.Window})
│ @ GLMakie ~/.julia/packages/GLMakie/TH3rf/src/screen.jl:935
│ [142] renderloop(screen::GLMakie.Screen{GLFW.Window})
│ @ GLMakie ~/.julia/packages/GLMakie/TH3rf/src/screen.jl:963
└ @ Makie ~/.julia/packages/Makie/Y3ABD/src/makielayout/interactions.jl:183