-
Notifications
You must be signed in to change notification settings - Fork 2
Open
Description
When I am trying to get the colorbar of a Pyramid this fails with the error below.
Maybe @asinghvi17 you have some pointers where I could best fix this:
julia> data = rand(300,300);
julia> dd = DimArray(data, (X(1:300), Y(1:300)))
┌ 300×300 DimArray{Float64, 2} ┐
├──────────────────────────────┴───────────────────── dims ┐
↓ X Sampled{Int64} 1:300 ForwardOrdered Regular Points,
→ Y Sampled{Int64} 1:300 ForwardOrdered Regular Points
└──────────────────────────────────────────────────────────┘
↓ → 1 2 3 4 5 … 297 298 299 300
⋮ ⋮ ⋱ ⋮
300 0.363112 0.540459 0.986404 0.400367 0.881563 … 0.0357517 0.882367 0.622528 0.554574
julia> pyramid = PS.Pyramid(dd)
reducefunc = Statistics.mean ∘ skipmissing
eltype(ras) = Float64
┌ Warning: The selected optimization algorithm requires second order derivatives, but `SecondOrder` ADtype was not provided.
│ So a `SecondOrder` with ADTypes.AutoForwardDiff() for both inner and outer will be created, this can be suboptimal and not work in some cases so
│ an explicit `SecondOrder` ADtype is recommended.
└ @ OptimizationBase ~/.julia/packages/OptimizationBase/ivotG/src/cache.jl:49
┌ 300×300 Pyramid{Float64, 2} ┐
├─────────────────────────────┴────────────────────── dims ┐
↓ X Sampled{Int64} 1:300 ForwardOrdered Regular Points,
→ Y Sampled{Int64} 1:300 ForwardOrdered Regular Points
├──────────────────────────────────────────────── metadata ┤
Dict{Any, Any} with 1 entry:
"resampling_method" => "mean_skipmissing"
├─────────────────────────────────────────── pyramidlevels ┤
Number of levels: 1
(300, 300)
(150, 150)
└──────────────────────────────────────────────────────────┘
julia> fig, axis, h = plot(pyramid)
julia> Colorbar(fig[1,2], h) # This fails with printing all the data in the pyramid for func /home/fcremer/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:1011
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:44
[2] ComputePipeline.TypedEdge(edge::ComputePipeline.ComputeEdge{…}, f::ComputePipeline.MapFunctionWrapper{…}, inputs::@NamedTuple{…})
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:140
[3] ComputePipeline.TypedEdge(edge::ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph})
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:120
[4] (::ComputePipeline.var"#resolve!##4#resolve!##5"{ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph}})()
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:664
[5] lock(f::ComputePipeline.var"#resolve!##4#resolve!##5"{ComputePipeline.ComputeEdge{…}}, l::ReentrantLock)
@ Base ./lock.jl:335
[6] resolve!(edge::ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph})
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:659
[7] _resolve!(computed::ComputePipeline.Computed)
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:652
[8] foreach
@ ./abstractarray.jl:3188 [inlined]
[9] (::ComputePipeline.var"#resolve!##4#resolve!##5"{ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph}})()
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:661
[10] lock(f::ComputePipeline.var"#resolve!##4#resolve!##5"{ComputePipeline.ComputeEdge{…}}, l::ReentrantLock)
@ Base ./lock.jl:335
[11] resolve!(edge::ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph})
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:659
[12] _resolve!(computed::ComputePipeline.Computed)
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:652
[13] foreach
@ ./abstractarray.jl:3188 [inlined]
[14] (::ComputePipeline.var"#resolve!##4#resolve!##5"{ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph}})()
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:661
[15] lock(f::ComputePipeline.var"#resolve!##4#resolve!##5"{ComputePipeline.ComputeEdge{…}}, l::ReentrantLock)
@ Base ./lock.jl:335
[16] resolve!(edge::ComputePipeline.ComputeEdge{ComputePipeline.ComputeGraph})
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:659
[17] _resolve!(computed::ComputePipeline.Computed)
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:652
[18] resolve!(computed::ComputePipeline.Computed)
@ ComputePipeline ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:644
[19] getindex
@ ~/.julia/packages/ComputePipeline/VcOdn/src/ComputePipeline.jl:563 [inlined]
[20] get_colormapping(plot::Heatmap{Tuple{Pyramid{…}}}, attr::ComputePipeline.ComputeGraph)
@ Makie ~/.julia/packages/Makie/TOy8O/src/compute-plots.jl:1027
[21] get_colormapping
@ ~/.julia/packages/Makie/TOy8O/src/compute-plots.jl:1025 [inlined]
[22] extract_colormap
@ ~/.julia/packages/Makie/TOy8O/src/makielayout/blocks/colorbar.jl:53 [inlined]
[23] extract_colormap_recursive(plot::Heatmap{Tuple{Pyramid{…}}})
@ Makie ~/.julia/packages/Makie/TOy8O/src/makielayout/blocks/colorbar.jl:103
[24] Colorbar(fig_or_scene::GridPosition, plot::Heatmap{Tuple{Pyramid{…}}}; kwargs::@Kwargs{})
@ Makie ~/.julia/packages/Makie/TOy8O/src/makielayout/blocks/colorbar.jl:123
[25] Colorbar(fig_or_scene::GridPosition, plot::Heatmap{Tuple{Pyramid{…}}})
@ Makie ~/.julia/packages/Makie/TOy8O/src/makielayout/blocks/colorbar.jl:121
[26] top-level scope
@ REPL[248]:1
Some type information was truncated. Use `show(err)` to see complete types.Metadata
Metadata
Assignees
Labels
No labels