Skip to content

Read HDF5 data #505

@Beforerr

Description

@Beforerr

In webpage, it states that it supports HDF5 file. However when I tried to read a dataset, it errored. Is there tutorials on how to do it correctly?

julia> YAXArrays.open_dataset("./data/dms_20200101_16e.001.hdf5")
ERROR: NetCDF error code -101:
        NetCDF: HDF error
Stacktrace:
 [1] check
   @ ~/.julia/packages/NetCDF/zhdMA/src/netcdf_helpers.jl:22 [inlined]
 [2] nc_open
   @ ~/.julia/packages/NetCDF/zhdMA/src/netcdf_c.jl:55 [inlined]
 [3] nc_open(fname::String, omode::UInt16)
   @ NetCDF ~/.julia/packages/NetCDF/zhdMA/src/netcdf_helpers.jl:103
 [4] open(fil::String; mode::UInt16, readdimvar::Bool, add_finalizer::Bool)
   @ NetCDF ~/.julia/packages/NetCDF/zhdMA/src/NetCDF.jl:918
 [5] open
   @ ~/.julia/packages/NetCDF/zhdMA/src/NetCDF.jl:915 [inlined]
 [6] open_dataset_handle(f::YAXArrays.Datasets.var"#67#75"{Tuple{}}, ds::NetCDFExt.NetCDFDataset)
   @ NetCDFExt ~/.julia/packages/YAXArrayBase/lAdRh/ext/NetCDFExt.jl:34
 [7] open_dataset(g::String; skip_keys::Tuple{}, driver::Symbol)
   @ YAXArrays.Datasets ~/.julia/packages/YAXArrays/x5iTf/src/DatasetAPI/Datasets.jl:433
 [8] open_dataset(g::String)
   @ YAXArrays.Datasets ~/.julia/packages/YAXArrays/x5iTf/src/DatasetAPI/Datasets.jl:430
 [9] top-level scope
   @ REPL[81]:1

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions