further update project files

Author: hexaeder

benchmark/Project.toml

@@ -25,20 +25,19 @@ NetworkDynamics = {path = ".."}
 [compat]
 AbstractTrees = "0.4.5"
 ArgParse = "1.2.0"
+CUDA = "≥0.0.1"
 CairoMakie = "0.13.1"
 Chairmarks = "1.3.1"
+Graphs = "≥0.0.1"
 Makie = "0.22.1"
 OrderedCollections = "1.7.0"
 PkgBenchmark = "0.2.12"
 PrettyTables = "2.4.0"
 ProgressMeter = "1.10.2"
-StableRNGs = "1.0.2"
-ThreadPinning = "1.0.2"
-UnicodePlots = "3.7.2"
-# the ones below are bound by NetworkDynamics.jl
-CUDA = "≥0.0.1"
-Graphs = "≥0.0.1"
 SciMLBase = "≥0.0.1"
+StableRNGs = "1.0.2"
 StaticArrays = "≥0.0.1"
 StyledStrings = "≥0.0.1"
+ThreadPinning = "1.0.2"
 TimerOutputs = "≥0.0.1"
+UnicodePlots = "3.7.2"

docs/Project.toml

@@ -15,6 +15,7 @@ ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
 NetworkDynamics = "22e9dc34-2a0d-11e9-0de0-8588d035468b"
 OrdinaryDiffEqNonlinearSolve = "127b3ac7-2247-4354-8eb6-78cf4e7c58e8"
 OrdinaryDiffEqRosenbrock = "43230ef6-c299-4910-a778-202eb28ce4ce"
+OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf"
 OrdinaryDiffEqTsit5 = "b1df2697-797e-41e3-8120-5422d3b24e4a"
 Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
@@ -36,21 +37,20 @@ Distributions = "0.25.117"
 Documenter = "1.8.0"
 DynamicQuantities = "1.4.0"
 GraphMakie = "0.5.13"
+Graphs = "≥0.0.1"
 LaTeXStrings = "1.4.0"
 LinearInterpolations = "0.1.4"
 Literate = "2.20.1"
+ModelingToolkit = "≥0.0.1"
 OrdinaryDiffEqNonlinearSolve = "1.3.0"
 OrdinaryDiffEqRosenbrock = "1.4.0"
 OrdinaryDiffEqTsit5 = "1.1.0"
 Plots = "1.40.9"
-SimpleWeightedGraphs = "1.4.0"
-StableRNGs = "1.0.2"
-# the ones below are bound by NetworkDynamics.jl
-Graphs = "≥0.0.1"
-ModelingToolkit = "≥0.0.1"
 Printf = "≥0.0.1"
 Random = "≥0.0.1"
 SciMLBase = "≥0.0.1"
+SimpleWeightedGraphs = "1.4.0"
+StableRNGs = "1.0.2"
 StaticArrays = "≥0.0.1"
 StyledStrings = "≥0.0.1"
 SymbolicIndexingInterface = "≥0.0.1"

test/Project.toml

@@ -49,7 +49,9 @@ TimerOutputs = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f"
 NetworkDynamics = {path = ".."}
 
 [compat]
+Adapt = "≥0.0.1"
 Aqua = "0.8.9"
+CUDA = "≥0.0.1"
 CairoMakie = "0.13.1"
 Chairmarks = "1.3.1"
 DelimitedFiles = "1.9.1"
@@ -59,36 +61,33 @@ DifferentiationInterfaceTest = "0.9"
 DynamicQuantities = "1.4.0"
 ExplicitImports = "1.10.1"
 FiniteDiff = "2.26.2"
+ForwardDiff = "≥0.0.1"
 GraphMakie = "0.5.13"
+Graphs = "≥0.0.1"
+InteractiveUtils = "≥0.0.1"
+KernelAbstractions = "≥0.0.1"
+LinearAlgebra = "≥0.0.1"
 LinearInterpolations = "0.1.4"
 Logging = "1"
+ModelingToolkit = "≥0.0.1"
 OrderedCollections = "1.7.0"
 OrdinaryDiffEqNonlinearSolve = "1.3.0"
 OrdinaryDiffEqRosenbrock = "1.4.0"
 OrdinaryDiffEqSDIRK = "1.2.0"
 OrdinaryDiffEqTsit5 = "1.1.0"
 Pkg = "1"
 Plots = "1.40.9"
-SafeTestsets = "0.1.0"
-SimpleWeightedGraphs = "1.4.0"
-StableRNGs = "1.0.2"
-Test = "1"
-# the ones below are bound by NetworkDynamics.jl
-Adapt = "≥0.0.1"
-CUDA = "≥0.0.1"
-ForwardDiff = "≥0.0.1"
-Graphs = "≥0.0.1"
-InteractiveUtils = "≥0.0.1"
-KernelAbstractions = "≥0.0.1"
-LinearAlgebra = "≥0.0.1"
-ModelingToolkit = "≥0.0.1"
 Printf = "≥0.0.1"
 Random = "≥0.0.1"
+SafeTestsets = "0.1.0"
 SciMLBase = "≥0.0.1"
+SimpleWeightedGraphs = "1.4.0"
 SparseArrays = "≥0.0.1"
+StableRNGs = "1.0.2"
 Static = "≥0.0.1"
 StaticArrays = "≥0.0.1"
 SteadyStateDiffEq = "≥0.0.1"
 SymbolicIndexingInterface = "≥0.0.1"
 Symbolics = "≥0.0.1"
+Test = "1"
 TimerOutputs = "≥0.0.1"