Resolving package versions...
Updating `~/.julia/environments/v1.12/Project.toml`
[e6c19c8d] + SGtSNEpi v0.4.0
Updating `~/.julia/environments/v1.12/Manifest.toml`
⌅ [3da002f7] ↓ ColorTypes v0.12.1 ⇒ v0.11.5
⌃ [c3611d14] ↓ ColorVectorSpace v0.11.0 ⇒ v0.10.0
⌅ [5ae59095] ↓ Colors v0.13.1 ⇒ v0.12.11
[b4f34e82] + Distances v0.10.12
[0e44f5e4] + Hwloc v3.3.0
[b8a86587] + NearestNeighbors v0.4.22
[e6c19c8d] + SGtSNEpi v0.4.0
[e33a78d0] + Hwloc_jll v2.12.2+0
⌅ [02c8fc9c] + XML2_jll v2.13.9+0
[a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0
[c2c51ba6] + sgtsnepi_jll v3.0.0+0
Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
✗ LEMONGraphs
✗ GraphsMatching
Precompiling packages finished.
27 dependencies successfully precompiled in 108 seconds. 327 already precompiled.
2 dependencies errored.
For a report of the errors see `julia> err`. To retry use `pkg> precompile`
julia> err
PkgPrecompileError: The following 1 direct dependency failed to precompile:
GraphsMatching
Failed to precompile GraphsMatching [c3af3a8c-b79e-4b01-bf44-c718d7e0e0d6] to "/Users/oscar/.julia/compiled/v1.12/GraphsMatching/jl_Z7Y25n".
C++ exception while wrapping module Lib: invalid subtyping in definition of ListGraphNode with supertype Any
ERROR: LoadError: invalid subtyping in definition of ListGraphNode with supertype Any
Stacktrace:
[1] register_julia_module
@ ~/.julia/packages/CxxWrap/ZPNvc/src/CxxWrap.jl:467 [inlined]
[2] readmodule(so_path_cb::typeof(LEMON_jll.get_liblemoncxxwrap_path), funcname::Symbol, m::Module, flags::Nothing)
@ CxxWrap.CxxWrapCore ~/.julia/packages/CxxWrap/ZPNvc/src/CxxWrap.jl:864
[3] wrapmodule(so_path_cb::Function, funcname::Symbol, m::Module, flags::Nothing)
@ CxxWrap.CxxWrapCore ~/.julia/packages/CxxWrap/ZPNvc/src/CxxWrap.jl:874
[4] include(mod::Module, _path::String)
@ Base ./Base.jl:306
[5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2997
[6] eval(m::Module, e::Any)
@ Core ./boot.jl:489
[7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base ./loading.jl:2843
[8] include_string
@ ./loading.jl:2853 [inlined]
[9] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:315
[10] _start()
@ Base ./client.jl:550
in expression starting at /Users/oscar/.julia/packages/LEMONGraphs/VIGzg/src/LEMONGraphs.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile LEMONGraphs [14b1564f-c77f-4800-9e89-efd961faef7c] to "/Users/oscar/.julia/compiled/v1.12/LEMONGraphs/jl_8mIcNk".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:44
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
@ Base ./loading.jl:3284
[3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()
@ Base ./loading.jl:2652
[4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.12.0+0.aarch64.apple.darwin14/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
[5] #mkpidlock#7
@ ~/.julia/juliaup/julia-1.12.0+0.aarch64.apple.darwin14/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
[6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.12.0+0.aarch64.apple.darwin14/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
[7] #invokelatest_gr#232
@ ./reflection.jl:1282 [inlined]
[8] invokelatest_gr
@ ./reflection.jl:1274 [inlined]
[9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:3855
[10] maybe_cachefile_lock
@ ./loading.jl:3852 [inlined]
[11] __require_prelocked(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2638
[12] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2465
[13] macro expansion
@ ./loading.jl:2393 [inlined]
[14] macro expansion
@ ./lock.jl:376 [inlined]
[15] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2358
[16] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2334
[17] top-level scope
@ ~/.julia/packages/GraphsMatching/0EoW1/src/GraphsMatching.jl:10
[18] include(mod::Module, _path::String)
@ Base ./Base.jl:306
[19] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
@ Base ./loading.jl:2997
[20] top-level scope
@ stdin:5
[21] eval(m::Module, e::Any)
@ Core ./boot.jl:489
[22] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base ./loading.jl:2843
[23] include_string
@ ./loading.jl:2853 [inlined]
[24] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:315
[25] _start()
@ Base ./client.jl:550
in expression starting at /Users/oscar/.julia/packages/GraphsMatching/0EoW1/src/GraphsMatching.jl:1
in expression starting at stdin: ```
