Avoid import of whole util module

Author: fjwillemsen

.gitignore

@@ -2,7 +2,7 @@
 poetry.lock
 noxenv.txt
 noxsettings.toml
-hyperparamtuning/*
+hyperparamtuning*/*
 *.prof
 
 ### Python ###

doc/requirements.txt

@@ -36,7 +36,7 @@ nbclient==0.10.2 ; python_version >= "3.10" and python_version <= "3.11" or pyth
 nbconvert==7.16.6 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 nbformat==5.10.4 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 nbsphinx==0.9.7 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
-numpy==2.2.4 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
+numpy==1.26.4 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 packaging==24.2 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 pandas==2.2.3 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 pandocfilters==1.5.1 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
@@ -45,7 +45,7 @@ pexpect==4.9.0 ; python_version >= "3.10" and python_version <= "3.11" and (sys_
 platformdirs==4.3.7 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 pluggy==1.5.0 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 prompt-toolkit==3.0.50 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
-ptyprocess==0.7.0 ; python_version >= "3.10" and python_version <= "3.11" and os_name != "nt" or python_version >= "3.10" and python_version <= "3.11" and (sys_platform != "win32" and sys_platform != "emscripten") or python_version >= "3.12" and python_version < "3.15" and os_name != "nt" or python_version >= "3.12" and python_version < "3.15" and (sys_platform != "win32" and sys_platform != "emscripten")
+ptyprocess==0.7.0 ; python_version >= "3.10" and python_version <= "3.11" and (sys_platform != "win32" and sys_platform != "emscripten") or python_version >= "3.10" and python_version <= "3.11" and os_name != "nt" or python_version >= "3.12" and python_version < "3.15" and (sys_platform != "win32" and sys_platform != "emscripten") or python_version >= "3.12" and python_version < "3.15" and os_name != "nt"
 pure-eval==0.2.3 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 pycparser==2.22 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"
 pygments==2.19.1 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15"

doc/requirements_test.txt

@@ -189,62 +189,43 @@ nox-poetry==1.2.0 ; python_version >= "3.10" and python_version <= "3.11" or pyt
 nox==2024.10.9 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15" \
     --hash=sha256:1d36f309a0a2a853e9bccb76bbef6bb118ba92fa92674d15604ca99adeb29eab \
     --hash=sha256:7aa9dc8d1c27e9f45ab046ffd1c3b2c4f7c91755304769df231308849ebded95
-numpy==2.2.4 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15" \
-    --hash=sha256:05c076d531e9998e7e694c36e8b349969c56eadd2cdcd07242958489d79a7286 \
-    --hash=sha256:0d54974f9cf14acf49c60f0f7f4084b6579d24d439453d5fc5805d46a165b542 \
-    --hash=sha256:11c43995255eb4127115956495f43e9343736edb7fcdb0d973defd9de14cd84f \
-    --hash=sha256:188dcbca89834cc2e14eb2f106c96d6d46f200fe0200310fc29089657379c58d \
-    --hash=sha256:1974afec0b479e50438fc3648974268f972e2d908ddb6d7fb634598cdb8260a0 \
-    --hash=sha256:1cf4e5c6a278d620dee9ddeb487dc6a860f9b199eadeecc567f777daace1e9e7 \
-    --hash=sha256:207a2b8441cc8b6a2a78c9ddc64d00d20c303d79fba08c577752f080c4007ee3 \
-    --hash=sha256:218f061d2faa73621fa23d6359442b0fc658d5b9a70801373625d958259eaca3 \
-    --hash=sha256:2aad3c17ed2ff455b8eaafe06bcdae0062a1db77cb99f4b9cbb5f4ecb13c5146 \
-    --hash=sha256:2fa8fa7697ad1646b5c93de1719965844e004fcad23c91228aca1cf0800044a1 \
-    --hash=sha256:31504f970f563d99f71a3512d0c01a645b692b12a63630d6aafa0939e52361e6 \
-    --hash=sha256:3387dd7232804b341165cedcb90694565a6015433ee076c6754775e85d86f1fc \
-    --hash=sha256:4ba5054787e89c59c593a4169830ab362ac2bee8a969249dc56e5d7d20ff8df9 \
-    --hash=sha256:4f92084defa704deadd4e0a5ab1dc52d8ac9e8a8ef617f3fbb853e79b0ea3592 \
-    --hash=sha256:65ef3468b53269eb5fdb3a5c09508c032b793da03251d5f8722b1194f1790c00 \
-    --hash=sha256:6f527d8fdb0286fd2fd97a2a96c6be17ba4232da346931d967a0630050dfd298 \
-    --hash=sha256:7051ee569db5fbac144335e0f3b9c2337e0c8d5c9fee015f259a5bd70772b7e8 \
-    --hash=sha256:7716e4a9b7af82c06a2543c53ca476fa0b57e4d760481273e09da04b74ee6ee2 \
-    --hash=sha256:79bd5f0a02aa16808fcbc79a9a376a147cc1045f7dfe44c6e7d53fa8b8a79392 \
-    --hash=sha256:7a4e84a6283b36632e2a5b56e121961f6542ab886bc9e12f8f9818b3c266bfbb \
-    --hash=sha256:8120575cb4882318c791f839a4fd66161a6fa46f3f0a5e613071aae35b5dd8f8 \
-    --hash=sha256:81413336ef121a6ba746892fad881a83351ee3e1e4011f52e97fba79233611fd \
-    --hash=sha256:8146f3550d627252269ac42ae660281d673eb6f8b32f113538e0cc2a9aed42b9 \
-    --hash=sha256:879cf3a9a2b53a4672a168c21375166171bc3932b7e21f622201811c43cdd3b0 \
-    --hash=sha256:892c10d6a73e0f14935c31229e03325a7b3093fafd6ce0af704be7f894d95687 \
-    --hash=sha256:92bda934a791c01d6d9d8e038363c50918ef7c40601552a58ac84c9613a665bc \
-    --hash=sha256:9ba03692a45d3eef66559efe1d1096c4b9b75c0986b5dff5530c378fb8331d4f \
-    --hash=sha256:9eeea959168ea555e556b8188da5fa7831e21d91ce031e95ce23747b7609f8a4 \
-    --hash=sha256:a0258ad1f44f138b791327961caedffbf9612bfa504ab9597157806faa95194a \
-    --hash=sha256:a761ba0fa886a7bb33c6c8f6f20213735cb19642c580a931c625ee377ee8bd39 \
-    --hash=sha256:a7b9084668aa0f64e64bd00d27ba5146ef1c3a8835f3bd912e7a9e01326804c4 \
-    --hash=sha256:a84eda42bd12edc36eb5b53bbcc9b406820d3353f1994b6cfe453a33ff101775 \
-    --hash=sha256:ab2939cd5bec30a7430cbdb2287b63151b77cf9624de0532d629c9a1c59b1d5c \
-    --hash=sha256:ac0280f1ba4a4bfff363a99a6aceed4f8e123f8a9b234c89140f5e894e452ecd \
-    --hash=sha256:adf8c1d66f432ce577d0197dceaac2ac00c0759f573f28516246351c58a85020 \
-    --hash=sha256:b4adfbbc64014976d2f91084915ca4e626fbf2057fb81af209c1a6d776d23e3d \
-    --hash=sha256:bb649f8b207ab07caebba230d851b579a3c8711a851d29efe15008e31bb4de24 \
-    --hash=sha256:bce43e386c16898b91e162e5baaad90c4b06f9dcbe36282490032cec98dc8ae7 \
-    --hash=sha256:bd3ad3b0a40e713fc68f99ecfd07124195333f1e689387c180813f0e94309d6f \
-    --hash=sha256:c3f7ac96b16955634e223b579a3e5798df59007ca43e8d451a0e6a50f6bfdfba \
-    --hash=sha256:cf28633d64294969c019c6df4ff37f5698e8326db68cc2b66576a51fad634880 \
-    --hash=sha256:d0f35b19894a9e08639fd60a1ec1978cb7f5f7f1eace62f38dd36be8aecdef4d \
-    --hash=sha256:db1f1c22173ac1c58db249ae48aa7ead29f534b9a948bc56828337aa84a32ed6 \
-    --hash=sha256:dbe512c511956b893d2dacd007d955a3f03d555ae05cfa3ff1c1ff6df8851854 \
-    --hash=sha256:df2f57871a96bbc1b69733cd4c51dc33bea66146b8c63cacbfed73eec0883017 \
-    --hash=sha256:e2f085ce2e813a50dfd0e01fbfc0c12bbe5d2063d99f8b29da30e544fb6483b8 \
-    --hash=sha256:e642d86b8f956098b564a45e6f6ce68a22c2c97a04f5acd3f221f57b8cb850ae \
-    --hash=sha256:e9e0a277bb2eb5d8a7407e14688b85fd8ad628ee4e0c7930415687b6564207a4 \
-    --hash=sha256:ea2bb7e2ae9e37d96835b3576a4fa4b3a97592fbea8ef7c3587078b0068b8f09 \
-    --hash=sha256:ee4d528022f4c5ff67332469e10efe06a267e32f4067dc76bb7e2cddf3cd25ff \
-    --hash=sha256:f05d4198c1bacc9124018109c5fba2f3201dbe7ab6e92ff100494f236209c960 \
-    --hash=sha256:f34dc300df798742b3d06515aa2a0aee20941c13579d7a2f2e10af01ae4901ee \
-    --hash=sha256:f4162988a360a29af158aeb4a2f4f09ffed6a969c9776f8f3bdee9b06a8ab7e5 \
-    --hash=sha256:f486038e44caa08dbd97275a9a35a283a8f1d2f0ee60ac260a1790e76660833c \
-    --hash=sha256:f7de08cbe5551911886d1ab60de58448c6df0f67d9feb7d1fb21e9875ef95e91
+numpy==1.26.4 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15" \
+    --hash=sha256:03a8c78d01d9781b28a6989f6fa1bb2c4f2d51201cf99d3dd875df6fbd96b23b \
+    --hash=sha256:08beddf13648eb95f8d867350f6a018a4be2e5ad54c8d8caed89ebca558b2818 \
+    --hash=sha256:1af303d6b2210eb850fcf03064d364652b7120803a0b872f5211f5234b399f20 \
+    --hash=sha256:1dda2e7b4ec9dd512f84935c5f126c8bd8b9f2fc001e9f54af255e8c5f16b0e0 \
+    --hash=sha256:2a02aba9ed12e4ac4eb3ea9421c420301a0c6460d9830d74a9df87efa4912010 \
+    --hash=sha256:2e4ee3380d6de9c9ec04745830fd9e2eccb3e6cf790d39d7b98ffd19b0dd754a \
+    --hash=sha256:3373d5d70a5fe74a2c1bb6d2cfd9609ecf686d47a2d7b1d37a8f3b6bf6003aea \
+    --hash=sha256:47711010ad8555514b434df65f7d7b076bb8261df1ca9bb78f53d3b2db02e95c \
+    --hash=sha256:4c66707fabe114439db9068ee468c26bbdf909cac0fb58686a42a24de1760c71 \
+    --hash=sha256:50193e430acfc1346175fcbdaa28ffec49947a06918b7b92130744e81e640110 \
+    --hash=sha256:52b8b60467cd7dd1e9ed082188b4e6bb35aa5cdd01777621a1658910745b90be \
+    --hash=sha256:60dedbb91afcbfdc9bc0b1f3f402804070deed7392c23eb7a7f07fa857868e8a \
+    --hash=sha256:62b8e4b1e28009ef2846b4c7852046736bab361f7aeadeb6a5b89ebec3c7055a \
+    --hash=sha256:666dbfb6ec68962c033a450943ded891bed2d54e6755e35e5835d63f4f6931d5 \
+    --hash=sha256:675d61ffbfa78604709862923189bad94014bef562cc35cf61d3a07bba02a7ed \
+    --hash=sha256:679b0076f67ecc0138fd2ede3a8fd196dddc2ad3254069bcb9faf9a79b1cebcd \
+    --hash=sha256:7349ab0fa0c429c82442a27a9673fc802ffdb7c7775fad780226cb234965e53c \
+    --hash=sha256:7ab55401287bfec946ced39700c053796e7cc0e3acbef09993a9ad2adba6ca6e \
+    --hash=sha256:7e50d0a0cc3189f9cb0aeb3a6a6af18c16f59f004b866cd2be1c14b36134a4a0 \
+    --hash=sha256:95a7476c59002f2f6c590b9b7b998306fba6a5aa646b1e22ddfeaf8f78c3a29c \
+    --hash=sha256:96ff0b2ad353d8f990b63294c8986f1ec3cb19d749234014f4e7eb0112ceba5a \
+    --hash=sha256:9fad7dcb1aac3c7f0584a5a8133e3a43eeb2fe127f47e3632d43d677c66c102b \
+    --hash=sha256:9ff0f4f29c51e2803569d7a51c2304de5554655a60c5d776e35b4a41413830d0 \
+    --hash=sha256:a354325ee03388678242a4d7ebcd08b5c727033fcff3b2f536aea978e15ee9e6 \
+    --hash=sha256:a4abb4f9001ad2858e7ac189089c42178fcce737e4169dc61321660f1a96c7d2 \
+    --hash=sha256:ab47dbe5cc8210f55aa58e4805fe224dac469cde56b9f731a4c098b91917159a \
+    --hash=sha256:afedb719a9dcfc7eaf2287b839d8198e06dcd4cb5d276a3df279231138e83d30 \
+    --hash=sha256:b3ce300f3644fb06443ee2222c2201dd3a89ea6040541412b8fa189341847218 \
+    --hash=sha256:b97fe8060236edf3662adfc2c633f56a08ae30560c56310562cb4f95500022d5 \
+    --hash=sha256:bfe25acf8b437eb2a8b2d49d443800a5f18508cd811fea3181723922a8a82b07 \
+    --hash=sha256:cd25bcecc4974d09257ffcd1f098ee778f7834c3ad767fe5db785be9a4aa9cb2 \
+    --hash=sha256:d209d8969599b27ad20994c8e41936ee0964e6da07478d6c35016bc386b66ad4 \
+    --hash=sha256:d5241e0a80d808d70546c697135da2c613f30e28251ff8307eb72ba696945764 \
+    --hash=sha256:edd8b5fe47dab091176d21bb6de568acdd906d1887a4584a15a9a96a1dca06ef \
+    --hash=sha256:f870204a840a60da0b12273ef34f7051e98c3b5961b61b0c2c1be6dfd64fbcd3 \
+    --hash=sha256:ffa75af20b44f8dba823498024771d5ac50620e6915abac414251bd971b4529f
 packaging==24.2 ; python_version >= "3.10" and python_version <= "3.11" or python_version >= "3.12" and python_version < "3.15" \
     --hash=sha256:09abb1bccd265c01f4a3aa3f7a7db064b36514d2cba19a2f694fe6150451a759 \
     --hash=sha256:c228a6dc5e932d346bc5739379109d49e8853dd8223571c7c5b55260edc0b97f

pyproject.toml

@@ -46,7 +46,7 @@ classifiers = [
 # ATTENTION: if anything is changed here, run `poetry update`
 requires-python = ">=3.10,<3.15"  # NOTE when changing the Python versions, also change the test versions in the Noxfile and GitHub Actions
 dependencies = [
-    "numpy>=1.26.0",    # Python 3.12 requires numpy at least 1.26
+    "numpy (>=1.26.0,<2.0.0)",    # Python 3.12 requires numpy at least 1.26, CuPy does not support 2.0
     "scipy>=1.14.1",
     "packaging",        # required by file_utils
     "jsonschema",