Update dependencies to latest versions

Bump various dependencies including ktlint to 12.1.2, commonsCsv to 1.12.0, openapi to 2.1.24, junit-jupiter to 5.11.3, junit-platform to 1.11.3, jsoup to 1.18.3, arrow to 18.1.0, ktor to 3.0.1, duckdb to 1.1.3, and geotools to 32.1. These updates are intended to incorporate the latest improvements and fixes from the dependency maintainers.

Author: Jolanrensen

gradle/libs.versions.toml

@@ -2,7 +2,7 @@
 ksp = "2.0.20-1.0.24"
 kotlinJupyter = "0.12.0-139"
 
-ktlint = "12.1.1"
+ktlint = "12.1.2"
 
 # make sure to sync both manually with :generator module
 kotlin = "2.0.20"
@@ -20,7 +20,7 @@ binaryCompatibilityValidator = "0.16.3"
 kover = "0.8.3"
 deephavenCsv = "0.15.0"
 fastDoubleParser = "2.0.1"
-commonsCsv = "1.11.0"
+commonsCsv = "1.12.0"
 commonsCompress = "1.27.1"
 commonsIo = "2.18.0"
 serialization = "1.7.1"
@@ -33,32 +33,32 @@ postgresql = "42.7.4"
 sqlite = "3.46.1.0"
 jtsCore = "1.19.0"
 kotlinDatetime = "0.6.1"
-openapi = "2.1.22"
+openapi = "2.1.24"
 kotlinLogging = "7.0.3"
 sl4j = "2.0.16"
 
 junit = "4.13.2"
-junit-jupiter = "5.11.0"
-junit-platform = "1.11.0"
+junit-jupiter = "5.11.3"
+junit-platform = "1.11.3"
 
 # TODO 5.8.0 is not possible due to https://github.com/Kotlin/dataframe/issues/595
 kotestAsserions = "5.5.4"
 
-jsoup = "1.18.1"
-arrow = "17.0.0"
+jsoup = "1.18.3"
+arrow = "18.1.0"
 docProcessor = "0.3.10"
 simpleGit = "2.0.3"
 dependencyVersions = "0.51.0"
 plugin-publish = "1.3.0"
 shadow = "8.3.5"
 android-gradle-api = "7.3.1" # Can't be updated to 7.4.0+ due to Java 8 compatibility
-ktor = "2.3.12"
+ktor = "3.0.1"
 kotlin-compile-testing = "1.6.0"
-duckdb = "1.0.0"
+duckdb = "1.1.3"
 buildconfig = "5.5.1"
 benchmark = "0.4.12"
 
-geotools = "32.0"
+geotools = "32.1"
 jai-core = "1.1.3"
 jts = "1.20.0"