Rmagic

[Chloe-HJL]

Hi,

Thank you for the amazing package!

I was trying to run Rmagic as below,
data_MAGIC <- magic(count_matrix, knn=15, genes=c("CTLA4", "CLU", "CD3G"))

But it gave me error:
Error in is.null(x = genes) || is.na(x = genes) :
'length = 3' in coercion to 'logical(1)'

I'd presume that this might be due to an older version of other packages..
I am using R version 4.3.0 (2023-04-21) and added attached packages

Thank you!

[Jiangmeling]

Hello, I also happened to encounter the same problem, how do you think you could solve it? Thank you very much!

[LenisLin]

the same problem happened also. did you check the magic in python have installed correctly ?

[elizabethmcmillan]

Did anyone solve this? I can't find a workaround