Merge pull request #32 from KrishnaswamyLab/dev

graphtools v1.0.0

Author: scottgigante

.travis.yml

@@ -1,12 +1,14 @@
   language: python
   python:
-    - "2.7"
     - "3.5"
     - "3.6"
+    - "3.7-dev"
 
   sudo: required
 
-  cache: pip
+  cache:
+    - pip
+    - apt
 
   addons:
     apt:
@@ -18,5 +20,16 @@
     - python setup.py test
     - cd doc; make html; cd ..
 
+  deploy:
+    provider: pypi
+    user: scottgigante
+    password: ${PYPI_PASSWORD}
+    distributions: sdist bdist_wheel
+    skip_existing: true
+    skip_cleanup: true
+    on:
+      tags: true
+      branch: master
+
   after_success:
     - coveralls

graphtools/base.py

@@ -65,6 +65,9 @@ def _get_param_names(cls):
         return parameters
 
     def set_params(self, **kwargs):
+        # for k in kwargs:
+        #     raise TypeError("set_params() got an unexpected "
+        #                     "keyword argument '{}'".format(k))
         return self
 
 
@@ -866,3 +869,28 @@ def interpolate(self, transform, transitions=None, Y=None):
                 transitions = self.extend_to_data(Y)
         Y_transform = transitions.dot(transform)
         return Y_transform
+
+    def set_params(self, **params):
+        """Set parameters on this object
+
+        Safe setter method - attributes should not be modified directly as some
+        changes are not valid.
+        Valid parameters:
+        - n_jobs
+        - verbose
+
+        Parameters
+        ----------
+        params : key-value pairs of parameter name and new values
+
+        Returns
+        -------
+        self
+        """
+        if 'n_jobs' in params:
+            self.n_jobs = params['n_jobs']
+        if 'verbose' in params:
+            self.verbose = params['verbose']
+            tasklogger.set_level(self.verbose)
+        super().set_params(**params)
+        return self