Can't locate Bio/SeqIO.pm in @INC

[gpmoran]

So I have installed phame and the dependencies separately in a new environment and installed phame by cloning the github version, as recommended in another thread.
When I run the TestAll.sh I get an error that it can't locate Bio/SeqIO.pm in @inc. I think this should have been installed with bioPerl so I am not sure why it cannot locate it?

(my_env) Garys-MacBook-Pro:PhaME garymoran$ test/TestAll.sh 1
Can't locate Bio/SeqIO.pm in @inc (you may need to install the Bio::SeqIO module) (@inc contains: /Users/garymoran/PhaME/src/../ext/lib/perl5 /Users/garymoran/PhaME/src/../lib /Users/garymoran/PhaME/src /Users/garymoran/miniconda2/envs/my_env/lib/site_perl/5.26.2/darwin-thread-multi-2level /Users/garymoran/miniconda2/envs/my_env/lib/site_perl/5.26.2 /Users/garymoran/miniconda2/envs/my_env/lib/5.26.2/darwin-thread-multi-2level /Users/garymoran/miniconda2/envs/my_env/lib/5.26.2 .) at src/phame line 16.
BEGIN failed--compilation aborted at src/phame line 16.

Thanks for any suggested solutions!

[drish91]

I was running into a similar issue and updating the PERL5LIB env path with the perl5 libs under the phame_env installation path fixed this. This should add the necessary perl libraries in your @inc.

export PERL5LIB="/path/for/anaconda3/envs/phame_new/lib/perl5/site_perl/5.22.0"

[gpmoran]

Thank you, this has solved the issue for me!