Update README.md

Author: chienchi

README.md

@@ -6,7 +6,7 @@
 <ins>R</ins>ecombinant <ins>A</ins>nd <ins>M</ins>ixed-<ins>I</ins>nfection <ins>Fi</ins>nder for SARS-CoV-2 sample. It takes input from aligned bam file  (aligned to [NC_045512](https://github.com/chienchi/ramifi/blob/main/ramifi/data/NC_045512.fasta)) based on [defined mutation list json file](https://github.com/chienchi/ramifi/blob/main/ramifi/data/variant_mutation.json)  provided in the repo and output recombinant and parents reads in .bam and .tsv file with associated stats file. 
 
 ## Design Diagram
-<img width="2339" alt="Ramifi_design_diagram" src="https://user-images.githubusercontent.com/737589/185190223-913f57e6-6da2-4202-85e4-77fa9400429e.png">
+<img width="2339" alt="Ramifi_design_diagram" src="https://user-images.githubusercontent.com/737589/214627513-7848eae0-3ebd-4864-97cf-dd8e8b3ed416.png">
 
 ## Dependencies
 
@@ -31,7 +31,7 @@
 Clone the `ramifi` repository.
 
 ```
-git clone https://github.com/chienchi/ramifi
+git clone https://github.com/LANL-Bioinformatics/ramifi
 ```
 
 Then change directory to `ramifi` and install.