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Point template cfgs to correct scratch directory
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‎README.md‎

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@@ -11,11 +11,14 @@ LEX was first described in Evans, et al., 2019[^1]
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## Dependencies
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The Python dependencies are listed in requirements*.txt but
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The Python dependencies are listed in requirements.txt and requirements-dev.txt but
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this suite depends on a set of reanalysis and observational datasets,
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which are part of E3SM-Diags, available on several DOE supported
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machines, including Perlmutter at NERSC, and Chrysalis at ANL\'s LCRC.
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The Python package itself is described in `pyproject.toml`, which is used by
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`pip` to install this package
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Currently, LEX is designed to run on Perlmutter, but future work is
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planned to support other machines.
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For example, to run the minimal example extension, place the output
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website in the `vv_test` directory, and serve the output
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website you\'d run this command:
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website you'd run this command:
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```bash
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$ livv -V config/example/example.yml -o $SCRATCH/vv_test -s
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$ livv -V config/example/example.yml -o vv_test -s
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```
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This will create a directory in `$SCRATCH` called `vv_test`
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This will create a directory in the current directory called `vv_test` (~7.5 MB), and spawn an HTTP server, which should only be used for testing purposes. (This works best if the output is in the current directory)
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*Note:* All the extension configurations files assume you are working
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from the top level `lex` directory. You *can* run any of these
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extensions from any directory, but you will need to edit the paths in

‎config/template_r025/cmb_ais.yml‎

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@@ -5,12 +5,12 @@ Climatic_Mass_Balance_AIS:
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Case ID: [CASE_ID]
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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_rcmais.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_rcmais.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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topo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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latlon: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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elevation: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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topo: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latv: lat
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lonv: lon
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smbv: QICE

‎config/template_r025/cmb_gis.yml‎

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@@ -5,12 +5,12 @@ Climatic_Mass_Balance_GIS:
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Case ID: [CASE_ID]
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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_rcmgis.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_rcmgis.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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topo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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latlon: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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elevation: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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topo: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latv: lat
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lonv: lon
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smbv: QICE

‎config/template_r025/energy_e3sm_ceres_ais.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_cmip6.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_cmip6.nc
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lnd_climo: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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glc_surf: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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latlon: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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elevation: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latv: lat
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lonv: lon
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topov: topo

‎config/template_r025/energy_e3sm_ceres_gis.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_cmip6.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_cmip6.nc
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lnd_climo: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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glc_surf: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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latlon: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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elevation: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latv: lat
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lonv: lon
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topov: topo

‎config/template_r025/energy_e3sm_era5_ais.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_era5.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_era5.nc
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lnd_climo: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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glc_surf: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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latlon: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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elevation: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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latv: lat
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lonv: lon
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topov: topo

‎config/template_r025/energy_e3sm_era5_gis.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_era5.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_era5.nc
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lnd_climo: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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glc_surf: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_era5.nc
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latlon: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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elevation: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_era5.nc
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latv: lat
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lonv: lon
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topov: topo

‎config/template_r025/energy_e3sm_merra2_merra_grid_ais.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_merra2.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_merra2.nc
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lnd_climo: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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glc_surf: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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latlon: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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elevation: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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latv: lat
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lonv: lon
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topov: topo

‎config/template_r025/energy_e3sm_merra2_merra_grid_gis.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_merra2.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_merra2.nc
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lnd_climo: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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glc_surf: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.ANN_mean_merra2.nc
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latlon: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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elevation: CASE_OUT_DIR/remap/CASE_ID.ANN_mean_merra2.nc
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latv: lat
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lonv: lon
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topov: topo

‎config/template_r025/energy_e3sm_racmo_ais.yml‎

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Climatology years: [1980-2020]
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Model: [E3SM-ELM]
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img_height: 300
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climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.{clim}_mean.nc
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climo_remap: SCRATCH_DIR/lex/data/e3sm/CASE_ID/remap/CASE_ID.{clim}_mean_rcmais.nc
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lnd_climo: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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glc_surf: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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climo: CASE_OUT_DIR/CASE_ID.{clim}_mean.nc
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climo_remap: CASE_OUT_DIR/remap/CASE_ID.{clim}_mean_rcmais.nc
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lnd_climo: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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glc_surf: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latlon: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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elevation: SCRATCH_DIR/lex/data/e3sm/CASE_ID/CASE_ID.ANN_mean.nc
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latlon: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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elevation: CASE_OUT_DIR/CASE_ID.ANN_mean.nc
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latv: lat
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lonv: lon
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topov: topo

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