updated adk_transitions docs

Author: orbeckst

MDAnalysisData/descr/adk_transitions_FRODA.rst

@@ -13,7 +13,7 @@ Framework Rigidity Optimized Dynamics Algorithm (FRODA)
 [Farrell2010]_. Each ensemble of independently generated paths
 contains 200 trajectories in the CHARMM DCD format.
 
-This data set contains the *FRODA* ensemble.
+This data set contains the **FRODA** ensemble.
 
 FRODA AdK with geometric targeting on a rigid decomposition (FRODA
 server); closed (1AKE) to open (4AKE). Topology file: 1ake.pdb

docs/adk_transitions.rst

@@ -13,13 +13,24 @@ trajectories during which the close-to-open transiton of the enzyme
 adenylate kinase [Seyler2014]_ is sampled using different
 computational methods [Seyler2015]_.
 
+   
 .. currentmodule:: MDAnalysisData.adk_transitions
 
 .. autosummary::
 
    fetch_adk_transitions_DIMS
    fetch_adk_transitions_FRODA   
 
+.. SeeAlso:: This set of trajectories was used in the `SPIDAL
+   Tutorial: MDAnalysis with Midas/radical.pilot`_ where the ensemble
+   of 400 DIMS+FRODA trajectories is analyzed with the *Path
+   Similarity Analysis* method [Seyler2015]_. Computations on such a
+   large(ish) dataset are sped up by parallelization at the task level
+   with `RADICAL-Pilot`_.
+
+.. _`SPIDAL Tutorial: MDAnalysis with Midas/radical.pilot`:
+   https://www.mdanalysis.org/SPIDAL-MDAnalysis-Midas-tutorial/
+.. _`RADICAL-Pilot`: https://radical-cybertools.github.io/