Review addressed

Author: mhmohona

doc/source/contributing.rst

@@ -75,7 +75,7 @@ Some great resources for learning Git:
 
     * the `GitHub help pages <http://help.github.com/>`_.
     * the `NumPy's documentation <http://docs.scipy.org/doc/numpy/dev/index.html>`_.
-    * Matthew Brett's `The curious coder’s guide to git <https://matthew-brett.github.io/curious-git/>`_.
+    * Matthew Brett's `The curious coder’s guide to git <https://matthew-brett.github.io/pydagogue/>`_.
 
 ------------------------
 Getting started with Git

doc/source/examples/analysis/alignment_and_rms/README.rst

@@ -11,7 +11,7 @@ modules contain the functions used for aligning structures,
 aligning trajectories, and calculating root mean squared quantities.
 
 Demonstrations of alignment are in `align_structure <aligning_structure_to_another.ipynb>`__,
-`align_trajectory_first <aligning_trajectory_to_first_frame.ipynb>`__, and `align_trajectory <aligning_trajectory.ipynb>`__. Another example of
+`align_trajectory_first <aligning_trajectory_to_frame.ipynb>`__, and `align_trajectory <aligning_trajectory.ipynb>`__. Another example of
 generating an average structure from an alignment is demonstrated in
 `rmsf <rmsf.ipynb>`__. Typically, trajectories need to be aligned for RMSD and
 RMSF values to make sense.
@@ -35,3 +35,7 @@ RMSF values to make sense.
 
 .. _rmsd: /examples/analysis/alignment_and_rms/rmsd.ipynb
 .. _pairwise: /examples/analysis/alignment_and_rms/pairwise_rmsd.ipynb
+.. _align_structure: aligning_structure_to_another.ipynb
+.. _align_trajectory: aligning_trajectory.ipynb
+.. _align_trajectory_frame: aligning_trajectory_to_frame.ipynb
+

doc/source/releases.md

@@ -218,7 +218,7 @@ See the [CHANGELOG](https://github.com/MDAnalysis/mdanalysis/blob/release-2.5.0/
 * [@jvermaas](https://github.com/jvermaas) made their first contribution in https://github.com/MDAnalysis/mdanalysis/pull/4031
 * [@SophiaRuan](https://github.com/SophiaRuan) made their first contribution in https://github.com/MDAnalysis/mdanalysis/pull/4072
 * [@marinegor](https://github.com/marinegor) made their first contribution in https://github.com/MDAnalysis/mdanalysis/pull/4085
-* [@shaivimalik](https://github.com/shaivimalik) made their first contribution in https://github.com/MDAnalysis/mdanalysis/pull/4089
+* [@g2707](https://github.com/g2707) made their first contribution in https://github.com/MDAnalysis/mdanalysis/pull/4089
 * [@DanielJamesEvans](https://github.com/DanielJamesEvans) made their first contribution in https://github.com/MDAnalysis/mdanalysis/pull/4109
 
 ## Release 2.4.3 of MDAnalysis