@@ -688,10 +688,10 @@ def rmsip(self, other, n_components=None):
688688
689689 .. testsetup::
690690
691- >>> import MDAnalysis as mda
692- >>> import MDAnalysis.analysis.pca as pca
693- >>> from MDAnalysis.tests.datafiles import PSF, DCD
694- >>> u = mda.Universe(PSF, DCD)
691+ import MDAnalysis as mda
692+ import MDAnalysis.analysis.pca as pca
693+ from MDAnalysis.tests.datafiles import PSF, DCD
694+ u = mda.Universe(PSF, DCD)
695695
696696
697697 You can compare the RMSIP between different intervals of the same trajectory.
@@ -703,9 +703,9 @@ def rmsip(self, other, n_components=None):
703703 >>> second_interval = pca.PCA(u, select="backbone").run(start=25, stop=50)
704704 >>> last_interval = pca.PCA(u, select="backbone").run(start=75)
705705 >>> round(first_interval.rmsip(second_interval, n_components=3), 6)
706- 0.381476
706+ np.float64( 0.381476)
707707 >>> round(first_interval.rmsip(last_interval, n_components=3), 6)
708- 0.174782
708+ np.float64( 0.174782)
709709
710710
711711 See also
@@ -870,10 +870,10 @@ def rmsip(a, b, n_components=None):
870870
871871 .. testsetup::
872872
873- >>> import MDAnalysis as mda
874- >>> import MDAnalysis.analysis.pca as pca
875- >>> from MDAnalysis.tests.datafiles import PSF, DCD
876- >>> u = mda.Universe(PSF, DCD)
873+ import MDAnalysis as mda
874+ import MDAnalysis.analysis.pca as pca
875+ from MDAnalysis.tests.datafiles import PSF, DCD
876+ u = mda.Universe(PSF, DCD)
877877
878878
879879 You can compare the RMSIP between different intervals of the same trajectory.
@@ -887,11 +887,11 @@ def rmsip(a, b, n_components=None):
887887 >>> round(pca.rmsip(first_interval.results.p_components.T,
888888 ... second_interval.results.p_components.T,
889889 ... n_components=3), 6)
890- 0.381476
890+ np.float64( 0.381476)
891891 >>> round(pca.rmsip(first_interval.results.p_components.T,
892892 ... last_interval.results.p_components.T,
893893 ... n_components=3), 6)
894- 0.174782
894+ np.float64( 0.174782)
895895
896896
897897 .. versionadded:: 1.0.0
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