Skip to content

Commit ea817e3

Browse files
changed snakefile arg error
1 parent c54ca15 commit ea817e3

File tree

1 file changed

+2
-2
lines changed

1 file changed

+2
-2
lines changed

micaflow/resources/Snakefile

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -463,8 +463,8 @@ rule run_texture:
463463
image = rules.apply_warp_to_mni.output.warped,
464464
mask = ATLAS_MASK
465465
output:
466-
gradient = f"{OUT_DIR}/{SUBJECT}/{SESSION}/textures/{SUBJECT}_{SESSION}_MNI152-space_textures-{{modality}}_gradient-magnitude.nii",
467-
intensity = f"{OUT_DIR}/{SUBJECT}/{SESSION}/textures/{SUBJECT}_{SESSION}_MNI152-space_textures-{{modality}}_relative-intensity.nii"
466+
gradient = f"{OUT_DIR}/{SUBJECT}/{SESSION}/textures/{SUBJECT}_{SESSION}_MNI152-space_textures-{{modality}}_gradient-magnitude.nii.gz",
467+
intensity = f"{OUT_DIR}/{SUBJECT}/{SESSION}/textures/{SUBJECT}_{SESSION}_MNI152-space_textures-{{modality}}_relative-intensity.nii.gz"
468468
threads: LIGHT_THREADS
469469
shell:
470470
"""

0 commit comments

Comments
 (0)