update bigquery schemas for v2.0

Author: alistairewj

mimic-iv/buildmimic/bigquery/schemas/hosp/d_labitems.json

@@ -1 +1 @@
-[{"name": "itemid", "type": "INT64", "mode": "REQUIRED"}, {"name": "label", "type": "STRING", "mode": "NULLABLE"}, {"name": "fluid", "type": "STRING", "mode": "NULLABLE"}, {"name": "category", "type": "STRING", "mode": "NULLABLE"}, {"name": "loinc_code", "type": "STRING", "mode": "NULLABLE"}]
+[{"name": "itemid", "type": "INT64", "mode": "REQUIRED"}, {"name": "label", "type": "STRING", "mode": "NULLABLE"}, {"name": "fluid", "type": "STRING", "mode": "NULLABLE"}, {"name": "category", "type": "STRING", "mode": "NULLABLE"}]

mimic-iv/buildmimic/bigquery/schemas/hosp/emar_detail.json

@@ -1 +1 @@
-[{"name": "subject_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "emar_id", "type": "STRING", "mode": "REQUIRED"}, {"name": "emar_seq", "type": "INT64", "mode": "REQUIRED"}, {"name": "parent_field_ordinal", "type": "NUMERIC", "mode": "NULLABLE"}, {"name": "administration_type", "type": "STRING", "mode": "NULLABLE"}, {"name": "pharmacy_id", "type": "INT64", "mode": "NULLABLE"}, {"name": "barcode_type", "type": "STRING", "mode": "NULLABLE"}, {"name": "reason_for_no_barcode", "type": "STRING", "mode": "NULLABLE"}, {"name": "complete_dose_not_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_due", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_due_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_given_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "will_remainder_of_dose_be_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_amount_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_code", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_description", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_description_other", "type": "STRING", "mode": "NULLABLE"}, {"name": "prior_infusion_rate", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate_adjustment", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate_adjustment_amount", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "route", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_complete", "type": "STRING", "mode": "NULLABLE"}, {"name": "completion_interval", "type": "STRING", "mode": "NULLABLE"}, {"name": "new_iv_bag_hung", "type": "STRING", "mode": "NULLABLE"}, {"name": "continued_infusion_in_other_location", "type": "STRING", "mode": "NULLABLE"}, {"name": "restart_interval", "type": "STRING", "mode": "NULLABLE"}, {"name": "side", "type": "STRING", "mode": "NULLABLE"}, {"name": "site", "type": "STRING", "mode": "NULLABLE"}, {"name": "non_formulary_visual_verification", "type": "STRING", "mode": "NULLABLE"}]
+[{"name": "subject_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "emar_id", "type": "STRING", "mode": "REQUIRED"}, {"name": "emar_seq", "type": "INT64", "mode": "REQUIRED"}, {"name": "parent_field_ordinal", "type": "STRING", "mode": "NULLABLE"}, {"name": "administration_type", "type": "STRING", "mode": "NULLABLE"}, {"name": "pharmacy_id", "type": "INT64", "mode": "NULLABLE"}, {"name": "barcode_type", "type": "STRING", "mode": "NULLABLE"}, {"name": "reason_for_no_barcode", "type": "STRING", "mode": "NULLABLE"}, {"name": "complete_dose_not_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_due", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_due_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_given_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "will_remainder_of_dose_be_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_amount_given", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_code", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_description", "type": "STRING", "mode": "NULLABLE"}, {"name": "product_description_other", "type": "STRING", "mode": "NULLABLE"}, {"name": "prior_infusion_rate", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate_adjustment", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate_adjustment_amount", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_rate_unit", "type": "STRING", "mode": "NULLABLE"}, {"name": "route", "type": "STRING", "mode": "NULLABLE"}, {"name": "infusion_complete", "type": "STRING", "mode": "NULLABLE"}, {"name": "completion_interval", "type": "STRING", "mode": "NULLABLE"}, {"name": "new_iv_bag_hung", "type": "STRING", "mode": "NULLABLE"}, {"name": "continued_infusion_in_other_location", "type": "STRING", "mode": "NULLABLE"}, {"name": "restart_interval", "type": "STRING", "mode": "NULLABLE"}, {"name": "side", "type": "STRING", "mode": "NULLABLE"}, {"name": "site", "type": "STRING", "mode": "NULLABLE"}, {"name": "non_formulary_visual_verification", "type": "STRING", "mode": "NULLABLE"}]

mimic-iv/buildmimic/bigquery/schemas/hosp/prescriptions.json

@@ -1 +1 @@
-[{"name": "subject_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "hadm_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "pharmacy_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "starttime", "type": "DATETIME", "mode": "NULLABLE"}, {"name": "stoptime", "type": "DATETIME", "mode": "NULLABLE"}, {"name": "drug_type", "type": "STRING", "mode": "REQUIRED"}, {"name": "drug", "type": "STRING", "mode": "REQUIRED"}, {"name": "gsn", "type": "STRING", "mode": "NULLABLE"}, {"name": "ndc", "type": "STRING", "mode": "NULLABLE"}, {"name": "prod_strength", "type": "STRING", "mode": "NULLABLE"}, {"name": "form_rx", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_val_rx", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_unit_rx", "type": "STRING", "mode": "NULLABLE"}, {"name": "form_val_disp", "type": "STRING", "mode": "NULLABLE"}, {"name": "form_unit_disp", "type": "STRING", "mode": "NULLABLE"}, {"name": "doses_per_24_hrs", "type": "FLOAT64", "mode": "NULLABLE"}, {"name": "route", "type": "STRING", "mode": "NULLABLE"}]
+[{"name": "subject_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "hadm_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "pharmacy_id", "type": "INT64", "mode": "REQUIRED"}, {"name": "poe_id", "type": "STRING", "mode": "NULLABLE"}, {"name": "poe_seq", "type": "INT64", "mode": "NULLABLE"}, {"name": "starttime", "type": "DATETIME", "mode": "NULLABLE"}, {"name": "stoptime", "type": "DATETIME", "mode": "NULLABLE"}, {"name": "drug_type", "type": "STRING", "mode": "REQUIRED"}, {"name": "drug", "type": "STRING", "mode": "REQUIRED"}, {"name": "formulary_drug_cd", "type": "STRING", "mode": "NULLABLE"}, {"name": "gsn", "type": "STRING", "mode": "NULLABLE"}, {"name": "ndc", "type": "STRING", "mode": "NULLABLE"}, {"name": "prod_strength", "type": "STRING", "mode": "NULLABLE"}, {"name": "form_rx", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_val_rx", "type": "STRING", "mode": "NULLABLE"}, {"name": "dose_unit_rx", "type": "STRING", "mode": "NULLABLE"}, {"name": "form_val_disp", "type": "STRING", "mode": "NULLABLE"}, {"name": "form_unit_disp", "type": "STRING", "mode": "NULLABLE"}, {"name": "doses_per_24_hrs", "type": "FLOAT64", "mode": "NULLABLE"}, {"name": "route", "type": "STRING", "mode": "NULLABLE"}]