From 27f75b83495cfbece57ec1dfd79357303210af59 Mon Sep 17 00:00:00 2001
From: aegis301 <57251443+aegis301@users.noreply.github.com>
Date: Sat, 24 Feb 2024 21:53:09 +0100
Subject: [PATCH 1/2] feat: implementation of fluid balance

---
 .../measurement/daily_fluid_balance.sql        | 16 ++++++++++++++++
 .../measurement/daily_fluid_in.sql             | 18 ++++++++++++++++++
 .../measurement/daily_fluid_out.sql            | 14 ++++++++++++++
 3 files changed, 48 insertions(+)
 create mode 100644 mimic-iv/concepts_postgres/measurement/daily_fluid_balance.sql
 create mode 100644 mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql
 create mode 100644 mimic-iv/concepts_postgres/measurement/daily_fluid_out.sql

diff --git a/mimic-iv/concepts_postgres/measurement/daily_fluid_balance.sql b/mimic-iv/concepts_postgres/measurement/daily_fluid_balance.sql
new file mode 100644
index 00000000..4edd7566
--- /dev/null
+++ b/mimic-iv/concepts_postgres/measurement/daily_fluid_balance.sql
@@ -0,0 +1,16 @@
+DROP TABLE IF EXISTS
+  mimiciv_derived.daily_fluid_balance
+CASCADE;
+
+CREATE TABLE
+  mimiciv_derived.daily_fluid_balance AS
+SELECT
+    i.stay_id,
+    i.infusion_date,
+    (
+    i.total_daily_amount - COALESCE(o.total_output, 0)
+  ) as net_balance
+FROM
+    mimiciv_derived.daily_fluid_in AS i
+    LEFT JOIN mimiciv_derived.daily_fluid_out AS o ON i.stay_id = o.stay_id
+        AND i.infusion_date = o.day;
\ No newline at end of file
diff --git a/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql b/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql
new file mode 100644
index 00000000..9b44b692
--- /dev/null
+++ b/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql
@@ -0,0 +1,18 @@
+DROP TABLE IF EXISTS mimiciv_derived.daily_fluid_in
+CASCADE;
+CREATE TABLE mimiciv_derived.daily_fluid_in AS
+WITH RECURSIVE infusion_days AS
+(
+  SELECT stay_id,
+    CAST(starttime AS DATE) AS infusion_date,
+    CASE 
+           WHEN CAST(starttime AS DATE) = CAST(endtime AS DATE) THEN amount
+           ELSE amount / EXTRACT(EPOCH FROM (endtime - starttime)) / 3600 * (24 - EXTRACT(HOUR FROM starttime))
+         END AS daily_amount,
+    endtime
+FROM mimiciv_icu.inputevents
+)
+SELECT stay_id, infusion_date, SUM(daily_amount) AS total_daily_amount
+FROM infusion_days
+GROUP BY stay_id, infusion_date
+ORDER BY stay_id, infusion_date;
\ No newline at end of file
diff --git a/mimic-iv/concepts_postgres/measurement/daily_fluid_out.sql b/mimic-iv/concepts_postgres/measurement/daily_fluid_out.sql
new file mode 100644
index 00000000..7dde1bb3
--- /dev/null
+++ b/mimic-iv/concepts_postgres/measurement/daily_fluid_out.sql
@@ -0,0 +1,14 @@
+DROP TABLE IF EXISTS mimiciv_derived.daily_fluid_out;
+CREATE TABLE mimiciv_derived.daily_fluid_out AS
+SELECT
+    stay_id,
+    DATE(charttime) as day,
+    SUM(value) as total_output
+FROM
+    mimiciv_icu.outputevents
+GROUP BY 
+    stay_id, 
+    day
+ORDER BY 
+    stay_id, 
+    day;
\ No newline at end of file

From 90f5e00d1e2670c51032e8daf2cd517c88b9bb28 Mon Sep 17 00:00:00 2001
From: aegis301 <57251443+aegis301@users.noreply.github.com>
Date: Mon, 26 Feb 2024 12:52:39 +0100
Subject: [PATCH 2/2] fix: exclude non-ml units

---
 mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql b/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql
index 9b44b692..7cc049c8 100644
--- a/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql
+++ b/mimic-iv/concepts_postgres/measurement/daily_fluid_in.sql
@@ -4,13 +4,14 @@ CREATE TABLE mimiciv_derived.daily_fluid_in AS
 WITH RECURSIVE infusion_days AS
 (
   SELECT stay_id,
-    CAST(starttime AS DATE) AS infusion_date,
-    CASE 
+  CAST(starttime AS DATE) AS infusion_date,
+  CASE 
            WHEN CAST(starttime AS DATE) = CAST(endtime AS DATE) THEN amount
            ELSE amount / EXTRACT(EPOCH FROM (endtime - starttime)) / 3600 * (24 - EXTRACT(HOUR FROM starttime))
          END AS daily_amount,
-    endtime
+  endtime
 FROM mimiciv_icu.inputevents
+WHERE amountuom = 'ml'
 )
 SELECT stay_id, infusion_date, SUM(daily_amount) AS total_daily_amount
 FROM infusion_days