chore: update naming (#2227)

Author: wpbonelli

.build_rtd_docs/MAINPAGE.md

@@ -2,6 +2,6 @@
 
 The documentation here is extracted from the source code by [doxygen](https://www.doxygen.nl/index.html).
 
-The source code repository is hosted [on GitHub](https://github.com/MODFLOW-USGS/modflow6).
+The source code repository is hosted [on GitHub](https://github.com/MODFLOW-ORG/modflow6).
 
 This documentation is intended for MODFLOW 6 contributors and users of the MODFLOW 6 library/API. MODFLOW 6 usage documentation can be found [on ReadTheDocs](https://modflow6.readthedocs.io/en/latest/).

.build_rtd_docs/conf.py

@@ -203,7 +203,7 @@
 ]
 
 # html_theme_options = {
-#     "github_url": "https://github.com/MODFLOW-USGS/modflow6",
+#     "github_url": "https://github.com/MODFLOW-ORG/modflow6",
 #     "use_edit_page_button": False
 # }
 

.build_rtd_docs/index.rst

@@ -11,7 +11,7 @@ Contents:
 .. toctree::
    :maxdepth: 2
 
-   API Reference <https://modflow-usgs.github.io/modflow6/>
+   API Reference <https://MODFLOW-ORG.github.io/modflow6/>
    _mf6run/run-time-comparison.md
    _mf6run/deprecations.md
    mf6io

.build_rtd_docs/mf6io.rst

@@ -2,7 +2,7 @@ Input Guide
 -----------
 
 The latest version of the complete MODFLOW 6 input/output guide can be found
-`here <https://github.com/MODFLOW-USGS/modflow6-nightly-build/releases/>`_.
+`here <https://github.com/MODFLOW-ORG/modflow6-nightly-build/releases/>`_.
 This section enumerates and describes MODFLOW 6 input files.
 
 Simulation

.doc/conf.py

@@ -82,7 +82,7 @@
 # Settings for GitHub actions integration
 if on_rtd:
     extensions.append("rtds_action")
-    rtds_action_github_repo = "MODFLOW-USGS/modflow6"
+    rtds_action_github_repo = "MODFLOW-ORG/modflow6"
     rtds_action_path = "."
     rtds_action_artifact_prefix = "rtd-files-for-"
     rtds_action_github_token = os.environ.get("GITHUB_TOKEN", None)

.github/PULL_REQUEST_TEMPLATE.md

@@ -10,9 +10,9 @@ Checklist of items for pull request
 - [ ] Formatted new and modified Fortran source files with `fprettify`
 - [ ] Added doxygen comments to new and modified procedures
 - [ ] Updated meson files, makefiles, and Visual Studio project files for new source files
-- [ ] Updated [definition files](/MODFLOW-USGS/modflow6/tree/develop/doc/mf6io/mf6ivar)
-- [ ] Updated [develop.tex](/MODFLOW-USGS/modflow6/doc/ReleaseNotes/develop.tex) with a plain-language description of the bug fix, change, feature; required for changes that may affect users
-- [ ] Updated [input and output guide](/MODFLOW-USGS/modflow6/doc/mf6io)
+- [ ] Updated [definition files](/MODFLOW-ORG/modflow6/tree/develop/doc/mf6io/mf6ivar)
+- [ ] Updated [develop.tex](/MODFLOW-ORG/modflow6/doc/ReleaseNotes/develop.tex) with a plain-language description of the bug fix, change, feature; required for changes that may affect users
+- [ ] Updated [input and output guide](/MODFLOW-ORG/modflow6/doc/mf6io)
 - [ ] Removed checklist items not relevant to this pull request
 
-For additional information see [instructions for contributing](/MODFLOW-USGS/modflow6/.github/CONTRIBUTING.md) and [instructions for developing](/MODFLOW-USGS/modflow6/.github/DEVELOPER.md).
+For additional information see [instructions for contributing](/MODFLOW-ORG/modflow6/.github/CONTRIBUTING.md) and [instructions for developing](/MODFLOW-ORG/modflow6/.github/DEVELOPER.md).

.github/workflows/ci.yml

@@ -231,13 +231,13 @@ jobs:
       - name: Checkout test models
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-testmodels
+          repository: MODFLOW-ORG/modflow6-testmodels
           path: modflow6-testmodels
 
       - name: Checkout examples
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-examples
+          repository: MODFLOW-ORG/modflow6-examples
           path: modflow6-examples
 
       - name: Setup ${{ env.FC }} ${{ env.FC_V }}
@@ -335,7 +335,7 @@ jobs:
         if: runner.os == 'Linux'
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/usgslatex
+          repository: MODFLOW-ORG/usgslatex
           path: usgslatex
 
       - name: Install TeX Live
@@ -397,13 +397,13 @@ jobs:
       - name: Checkout test models
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-testmodels
+          repository: MODFLOW-ORG/modflow6-testmodels
           path: modflow6-testmodels
 
       - name: Checkout examples
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-examples
+          repository: MODFLOW-ORG/modflow6-examples
           path: modflow6-examples
 
       - name: Setup pixi

.github/workflows/compilers.yml

@@ -78,13 +78,13 @@ jobs:
       - name: Checkout modflow6-testmodels
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-testmodels
+          repository: MODFLOW-ORG/modflow6-testmodels
           path: modflow6-testmodels
 
       - name: Checkout modflow6-examples
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-examples
+          repository: MODFLOW-ORG/modflow6-examples
           path: modflow6-examples
 
       - name: Setup ${{ matrix.compiler }} ${{ matrix.version }}

.github/workflows/docs.yml

@@ -53,13 +53,13 @@ jobs:
       - name: Checkout modflow6-examples
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-examples
+          repository: MODFLOW-ORG/modflow6-examples
           path: modflow6-examples
 
       - name: Checkout usgslatex
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/usgslatex
+          repository: MODFLOW-ORG/usgslatex
           path: usgslatex
 
       - name: Setup pixi
@@ -201,7 +201,7 @@ jobs:
     name: rtd-trigger
     needs: rtd_build
     runs-on: ubuntu-22.04
-    if: github.repository_owner == 'MODFLOW-USGS' && github.event_name == 'push'
+    if: github.repository_owner == 'MODFLOW-ORG' && github.event_name == 'push'
     steps:
       - name: Checkout repo
         uses: actions/checkout@v4

.github/workflows/large.yml

@@ -63,7 +63,7 @@ jobs:
       - name: Checkout modflow6-largetestmodels
         uses: actions/checkout@v4
         with:
-          repository: MODFLOW-USGS/modflow6-largetestmodels
+          repository: MODFLOW-ORG/modflow6-largetestmodels
           path: modflow6-largetestmodels
 
       - name: Setup pixi