It would be hugely useful to have the autorun_eager collection script output a single column with the path to the most-processed BAM file.
I.e., the BAM file that also corresponds to the one where pseudo-haploid genotyping was run from, or other key statistics were calculated from.
That way, other follow-up scripts can use this automatically reported BAM path as input.
It would be hugely useful to have the autorun_eager collection script output a single column with the path to the most-processed BAM file.
I.e., the BAM file that also corresponds to the one where pseudo-haploid genotyping was run from, or other key statistics were calculated from.
That way, other follow-up scripts can use this automatically reported BAM path as input.