Skip to content

Commit 9d07a6a

Browse files
committed
updated markdown and script to latest
1 parent e340a19 commit 9d07a6a

File tree

10 files changed

+70
-86
lines changed

10 files changed

+70
-86
lines changed

script/process_markdown.ipynb

Lines changed: 57 additions & 71 deletions
Large diffs are not rendered by default.

src/pages/tools/CFDE-GSE.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,6 @@
11
---
22
featured: false
3+
id: 4a7f002a-b563-5c11-97cc-f0bb89c17a83
34
image: https://cfde-drc.s3.us-east-2.amazonaws.com/assets/img/GSE-screenshot.png
45
label: CFDE-GSE
56
layout: '@/layouts/Tools.astro'

src/pages/tools/Data Distillery Knowledge Graph.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,6 @@
11
---
22
icon: /img/ubkg.png
3+
id: b08fa45b-a979-509a-a3a5-de9616bec4e1
34
image: /img/ubkg-screenshot.png
45
label: Data Distillery Knowledge Graph
56
layout: '@/layouts/Tools.astro'

src/pages/tools/FAIRshake.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,7 @@
11
---
22
doi: https://doi.org/10.1016/j.cels.2019.09.011
33
icon: /img/fairshake.png
4+
id: 4b13395c-45b7-5911-b255-527934471945
45
image: /img/fairshake-screenshot.png
56
label: FAIRshake
67
layout: '@/layouts/Tools.astro'

src/pages/tools/GDLPA.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,7 @@
11
---
22
doi: https://doi.org/10.1093/bioadv/vbac013
33
icon: /img/gdlpa.png
4+
id: 3569c3de-97e3-5822-a895-d6c7d28da983
45
image: /img/gdlpa-screenshot.png
56
label: GDLPA
67
layout: '@/layouts/Tools.astro'

src/pages/tools/GeneSetCart.md

Lines changed: 4 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,12 +1,14 @@
11
---
2-
featured: false
2+
featured: true
33
icon: https://cfde-drc.s3.us-east-2.amazonaws.com/assets/img/g2sg-logo.png
4+
id: 9da81ef3-069b-51a3-8def-753e1dcf3ef1
45
image: https://cfde-drc.s3.us-east-2.amazonaws.com/assets/img/g2sg-screenshot.png
56
label: GeneSetCart
67
layout: '@/layouts/Tools.astro'
78
short_description: GeneSetCart is interactive web-based application that enables users
89
to fetch gene sets, augment, perform set operations, visualize, and analyze gene
910
sets in a single session.
11+
tutorial: '[ "https://www.youtube.com/watch?v=yp0pfpJt1_M" ]'
1012
url: https://g2sg.cfde.cloud/
1113
---
12-
GeneSetCart is an interactive web-based application that enables users to fetch gene sets from various Common Fund programs data sources, augment these sets with gene-gene co-expression correlations or protein-protein interactions, perform set operations such as union, consensus, and intersection on multiple sets, visualize and analyze these gene sets in a single session. GeneSetCart provides access to CFDE generated gene sets through a term query interface that returns gene sets related to all biomedical terms sourced from most CFDE DCCs.
14+
GeneSetCart is an interactive web-based application that enables users to fetch gene sets from various Common Fund programs data sources, augment these sets with gene-gene co-expression correlations or protein-protein interactions, perform set operations such as union, consensus, and intersection on multiple sets, visualize and analyze these gene sets in a single session.

src/pages/tools/PIGEAN.md

Lines changed: 0 additions & 11 deletions
This file was deleted.

src/pages/tools/Playbook Workflow Builder.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,7 @@
11
---
22
featured: true
33
icon: https://cfde-drc.s3.us-east-2.amazonaws.com/assets/img/PWB-logo-2024.png
4+
id: 08cd40cc-f35f-547f-a8d7-524859559b0c
45
image: /img/pwb-screenshot.png
56
label: Playbook Workflow Builder
67
layout: '@/layouts/Tools.astro'

src/pages/tools/ReproTox-KG.md

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,8 @@
11
---
22
doi: https://doi.org/10.1038/s43856-023-00329-2
3-
featured: true
3+
featured: false
44
icon: /img/reprotox-kg-logo.png
5+
id: 33ccfdb7-b5eb-5fca-9fb6-208b7b72099d
56
image: /img/reprotox-kg-screenshot.png
67
label: ReproTox-KG
78
layout: '@/layouts/Tools.astro'

src/pages/tools/Standard RNA-seq Processing Pipelines.md

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,6 @@
11
---
2-
featured: true
2+
featured: false
3+
id: dcb54e80-a288-54df-9283-be888901784f
34
image: /img/rna-seq_pipeline.png
45
label: Standard RNA-seq Processing Pipelines
56
layout: '@/layouts/Tools.astro'

0 commit comments

Comments
 (0)