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lines changed Original file line number Diff line number Diff line change 3030# HGNC ID
3131# Approved Symbol
3232# Approved Name
33+ # Previous Symbols
3334# Synonyms
3435# Entrez Gene ID (supplied by NCBI)
3536# Ensembl Gene ID (supplied by Ensembl)
36- GENE_URL = 'http://www.genenames.org/cgi-bin/download?col=gd_hgnc_id&col=gd_app_sym&col=gd_app_name&col=gd_aliases&col=md_eg_id&col=md_ensembl_id&status=Approved&status_opt=2&where=&order_by=gd_app_sym_sort&format=text&limit=&hgnc_dbtag=on&submit=submit'
37+ GENE_URL = 'http://www.genenames.org/cgi-bin/download?col=gd_hgnc_id&col=gd_app_sym&col=gd_app_name&col=gd_prev_sym&col= gd_aliases&col=md_eg_id&col=md_ensembl_id&status=Approved&status_opt=2&where=&order_by=gd_app_sym_sort&format=text&limit=&hgnc_dbtag=on&submit=submit'
3738DEFAULT_GENE_FILENAME = 'genes.tsv'
3839
3940# TODO: incorporate disease data from:
Original file line number Diff line number Diff line change @@ -122,6 +122,11 @@ def documents(self):
122122 'column' : 'Approved Symbol' ,
123123 'field' : 'alt_id' ,
124124 },
125+ {
126+ 'column' : 'Previous Symbols' ,
127+ 'field' : 'alt_id' ,
128+ 'delimiter' : ', ' ,
129+ },
125130 {
126131 'column' : 'Synonyms' ,
127132 'field' : 'alt_id' ,
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