Skip to content

Commit 7e7fcd8

Browse files
committed
prepare for v0.2.0 release
1 parent 680bfbe commit 7e7fcd8

11 files changed

+15920
-270
lines changed

README.md

Lines changed: 175 additions & 146 deletions
Large diffs are not rendered by default.
Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,4 +1,4 @@
1-
from .modules import confidence_metrics_plot, contact_map_comparison, contact_map_visualization_with_track, contact_map_visualization_without_track
1+
from .modules import confidence_metrics_plot, contact_map_comparison_monomer, contact_map_comparison_multimer, contact_map_visualization_with_track, contact_map_visualization_without_track
22

3-
__all__ = ["contact_map_diff", "plot_local_confidence", "plot_global_confidence", "contact_map_vis_with_track", "contact_map_vis_without_track"]
3+
__all__ = ["contact_map_diff_monomer", "contact_map_diff_multimer", "plot_local_confidence", "plot_global_confidence", "contact_map_vis_with_track", "contact_map_vis_without_track"]
44
__version__ = "0.2.0"

src/alphafold3_seqvis_toolkit/cli.py

Lines changed: 141 additions & 119 deletions
Large diffs are not rendered by default.
Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,7 @@
11
from .confidence_metrics_plot import plot_local_confidence, plot_global_confidence
2-
from .contact_map_comparison import contact_map_diff
2+
from .contact_map_comparison_monomer import contact_map_diff_monomer
3+
from .contact_map_comparison_multimer import contact_map_diff_multimer
34
from .contact_map_visualization_with_track import contact_map_vis_with_track
45
from .contact_map_visualization_without_track import contact_map_vis_without_track
56

6-
__all__ = ["plot_local_confidence", "plot_global_confidence", "contact_map_diff", "contact_map_vis_with_track", "contact_map_vis_without_track"]
7+
__all__ = ["plot_local_confidence", "plot_global_confidence", "contact_map_diff_monomer", "contact_map_diff_multimer", "contact_map_vis_with_track", "contact_map_vis_without_track"]

src/alphafold3_seqvis_toolkit/modules/contact_map_comparison.py renamed to src/alphafold3_seqvis_toolkit/modules/contact_map_comparison_monomer.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -18,7 +18,7 @@
1818
import os
1919
import re
2020

21-
def contact_map_diff(
21+
def contact_map_diff_monomer(
2222
mmcif_file_a: str,
2323
mmcif_file_b: str,
2424
chain_a: str,

src/alphafold3_seqvis_toolkit/modules/contact_map_comparison_multimer.py

Lines changed: 769 additions & 0 deletions
Large diffs are not rendered by default.

0 commit comments

Comments
 (0)