README.md

Reprogramming Distillation for Medical Foundation Models

This repository is an official PyTorch implementation of "Reprogramming Distillation for Medical Foundation Models"

Download Dataset

Coming soon

Run

For example, you can run the following command for RD training.

python run.py \
    --dataset aptos \
    --method rd \
    --downstream_model_name_or_path resnet18 \
    --foundation_model_name_or_path pmc_clip \
    --batch_size 128 \
    --lr 5e-05 \
    --epochs 80 \
    --epochs_stage2 250 \
    --gpu_id 0 \
    --kd_weight 1 \
    --ce_weight 1 \
    --seed 42 >> output.log

Citation

If you find RD useful for your research or development, please cite the following:

@inproceedings{zhou2024reprogramming,
  title={Reprogramming Distillation for Medical Foundation Models},
  author={Zhou, Yuhang and Du, Siyuan and Li, Haolin and Yao, Jiangchao and Zhang, Ya and Wang, Yanfeng},
  booktitle={International Conference on Medical Image Computing and Computer-Assisted Intervention},
  pages={533--543},
  year={2024},
  organization={Springer}
}