merge in upstream

Author: justinGilmer

paper/basic_training.bib

@@ -715,19 +715,19 @@ @article{Braun:2018:Anomalous
 }
 
 @InProceedings{Berne:1999:Molecular,
-  author={Berne, Bruce J.}
+  author={Berne, Bruce J.},
   editor={Deuflhard, Peter
   and Hermans, Jan
   and Leimkuhler, Benedict
   and Mark, Alan E.
   and Reich, Sebastian
-  and Skeel, Robert D.}
-  title={Molecular Dynamics in Systems with Multiple Time Scales: Reference System Propagator Algorithms}
-  booktitle={Computational Molecular Dynamics: Challenges, Methods, Ideas}
-  year={1999}
-  publisher={Springer}
-  address={Berlin}
-  pages={297--317}
+  and Skeel, Robert D.},
+  title={Molecular Dynamics in Systems with Multiple Time Scales: Reference System Propagator Algorithms},
+  booktitle={Computational Molecular Dynamics: Challenges, Methods, Ideas},
+  year={1999},
+  publisher={Springer},
+  address={Berlin},
+  pages={297--317},
   isbn={978-3-642-58360-5}
 }
 
@@ -771,6 +771,69 @@ @article{Mobley:2012:JComputAidedMolDes
   pages = {93-95},
 }
 
+@book{Reif:2008:,
+  title = {Fundamentals of {{Statistical}} and {{Thermal Physics}}},
+  publisher = {{Waveland Press}},
+  author = {Reif, Frederick},
+  year = {2008}
+}
+
+@book{McQuarrie:2000:,
+  title = {Statistical {{Mechanics}}},
+  publisher = {{University Science Books}},
+  author = {McQuarrie, Donald A.},
+  year = {2000}
+}
+
+@book{Hill:1987:,
+  title = {Statistical {{Mechanics}}: {{Principles}} and {{Selected Applications}}},
+  publisher = {{Dover Publications}},
+  author = {Hill, Terrell L.},
+  year = {1987}
+}
+
+@book{Chandler:1987:,
+  title = {Introduction to {{Modern Statistical Mechanics}}},
+  publisher = {{Oxford University Press}},
+  author = {Chandler, David},
+  month = sep,
+  year = {1987}
+}
+
+@book{Griffiths:2017:,
+  edition = {4th},
+  title = {Introduction to {{Electrodynamics}}},
+  publisher = {{Cambridge University Press}},
+  author = {Griffiths, David J.},
+  month = jul,
+  year = {2017}
+}
+
+@book{Jackson:1998:,
+  edition = {3rd},
+  title = {Classical {{Electrodynamics}}},
+  publisher = {{Wiley}},
+  author = {Jackson, John David},
+  year = {1998}
+}
+
+@book{McQuarrie:1997:,
+  title = {Phyysical {{Chemistry}}: {{A Molecular Approach}}},
+  publisher = {{University Science Books}},
+  author = {McQuarrie, Donald A. and Simon, John D.},
+  month = jul,
+  year = {1997}
+}
+
+@book{Kittel:1980:,
+  edition = {2nd},
+  title = {Thermal {{Physics}}},
+  publisher = {{W. H. Freeman}},
+  author = {Kittel, Charles and Kroemer, Herbert},
+  month = jan,
+  year = {1980}
+}
+
 @article{Fass2018,
 author = {Fass, Josh and Sivak, David and Crooks, Gavin E and Beauchamp, Kyle A and Leimkuhler, Benedict and Chodera, John},
 doi = {10.1101/266619},
@@ -815,3 +878,15 @@ @article{Kofke1993
 volume = {98},
 year = {1993}
 }
+
+@article{Shirts:2007:JPhysChemB,
+  title = {Accurate and Efficient Corrections for Missing Dispersion Interactions in Molecular Simulations.},
+  volume = {111},
+  doi = {10.1021/jp0735987},
+  number = {45},
+  journal = {J Phys Chem B},
+  author = {Shirts, Michael R and Mobley, David L and Chodera, John D and Pande, Vijay S},
+  month = nov,
+  year = {2007},
+  pages = {13052-13063},
+}