Merge pull request #158 from ModiaSim/SciMLBaseFullSpecialize

Use DiffEqBase 6.104.3 + reactivate MonteCarloSimulation tests

Author: MartinOtter

Manifest.toml

@@ -1,8 +1,8 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.7.3"
+julia_version = "1.8.1"
 manifest_format = "2.0"
-project_hash = "2829599ff99320f949dafcb539c87d6acb385bac"
+project_hash = "becb03a89b85534a06e2b6728f89ca47ad92290e"
 
 [[deps.Adapt]]
 deps = ["LinearAlgebra"]
@@ -12,6 +12,7 @@ version = "3.4.0"
 
 [[deps.ArgTools]]
 uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
+version = "1.1.1"
 
 [[deps.ArnoldiMethod]]
 deps = ["LinearAlgebra", "Random", "StaticArrays"]
@@ -140,6 +141,7 @@ version = "4.2.0"
 [[deps.CompilerSupportLibraries_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"
+version = "0.5.2+0"
 
 [[deps.ConstructionBase]]
 deps = ["LinearAlgebra"]
@@ -198,9 +200,9 @@ version = "0.4.0"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"]
-git-tree-sha1 = "ff3b0abda9ee27c36019fffce8aca4394505e503"
+git-tree-sha1 = "9cf35875034e50058848b2eeca9efa560cfa0ae6"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.104.2"
+version = "6.104.3"
 
 [[deps.DiffEqCallbacks]]
 deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArrays"]
@@ -244,9 +246,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
 
 [[deps.Distributions]]
 deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"]
-git-tree-sha1 = "ee407ce31ab2f1bacadc3bd987e96de17e00aed3"
+git-tree-sha1 = "34a557ce10eb2d9142f4ef60726b4f17c1c30941"
 uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
-version = "0.25.71"
+version = "0.25.73"
 
 [[deps.DocStringExtensions]]
 deps = ["LibGit2"]
@@ -257,6 +259,7 @@ version = "0.9.1"
 [[deps.Downloads]]
 deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
 uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
+version = "1.6.0"
 
 [[deps.DualNumbers]]
 deps = ["Calculus", "NaNMath", "SpecialFunctions"]
@@ -266,9 +269,9 @@ version = "0.6.8"
 
 [[deps.ExponentialUtilities]]
 deps = ["ArrayInterfaceCore", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SparseArrays", "libblastrampoline_jll"]
-git-tree-sha1 = "b40c9037e1a33990466bc5d224ced34b34eebdb0"
+git-tree-sha1 = "b19c3f5001b11b71d0f970f354677d604f3a1a97"
 uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18"
-version = "1.18.0"
+version = "1.19.0"
 
 [[deps.ExprTools]]
 git-tree-sha1 = "56559bbef6ca5ea0c0818fa5c90320398a6fbf8d"
@@ -456,10 +459,12 @@ version = "1.0.0"
 [[deps.LibCURL]]
 deps = ["LibCURL_jll", "MozillaCACerts_jll"]
 uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
+version = "0.6.3"
 
 [[deps.LibCURL_jll]]
 deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
 uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
+version = "7.84.0+0"
 
 [[deps.LibGit2]]
 deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
@@ -468,6 +473,7 @@ uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
 [[deps.LibSSH2_jll]]
 deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
 uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
+version = "1.10.2+0"
 
 [[deps.Libdl]]
 uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
@@ -521,6 +527,7 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
+version = "2.28.0+0"
 
 [[deps.Measurements]]
 deps = ["Calculus", "LinearAlgebra", "Printf", "RecipesBase", "Requires"]
@@ -551,6 +558,7 @@ version = "1.0.10"
 
 [[deps.MozillaCACerts_jll]]
 uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
+version = "2022.2.1"
 
 [[deps.MuladdMacro]]
 git-tree-sha1 = "c6190f9a7fc5d9d5915ab29f2134421b12d24a68"
@@ -577,6 +585,7 @@ version = "1.0.1"
 
 [[deps.NetworkOptions]]
 uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
+version = "1.2.0"
 
 [[deps.NonlinearSolve]]
 deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"]
@@ -593,10 +602,12 @@ version = "1.12.7"
 [[deps.OpenBLAS_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
 uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
+version = "0.3.20+0"
 
 [[deps.OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
+version = "0.8.1+0"
 
 [[deps.OpenSpecFun_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"]
@@ -616,10 +627,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
 version = "1.4.1"
 
 [[deps.OrdinaryDiffEq]]
-deps = ["Adapt", "ArrayInterface", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
-git-tree-sha1 = "d20891e46072ad2826fab4b9c8fcb4e4654eb8c9"
+deps = ["Adapt", "ArrayInterface", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
+git-tree-sha1 = "1977e3012d36690852d550839c71f0b1c87fb12c"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.26.4"
+version = "6.27.0"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
@@ -642,6 +653,7 @@ version = "2.4.0"
 [[deps.Pkg]]
 deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
+version = "1.8.0"
 
 [[deps.PoissonRandom]]
 deps = ["Random"]
@@ -769,6 +781,7 @@ version = "0.3.0+0"
 
 [[deps.SHA]]
 uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
+version = "0.7.0"
 
 [[deps.SIMDDualNumbers]]
 deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"]
@@ -789,9 +802,9 @@ version = "0.6.35"
 
 [[deps.SciMLBase]]
 deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"]
-git-tree-sha1 = "8c7acbc1a974db5f533b59ab74b69042fa05b002"
+git-tree-sha1 = "ce26aa756fd46913a6139e5259749f72169f5b5d"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "1.57.0"
+version = "1.58.0"
 
 [[deps.Serialization]]
 uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
@@ -895,9 +908,9 @@ version = "1.9.0"
 
 [[deps.StochasticDiffEq]]
 deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
-git-tree-sha1 = "47648a908783ddbd124cf3deb3eb0d18b7cffcce"
+git-tree-sha1 = "8062351f645bb23725c494be74619ef802a2ffa8"
 uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0"
-version = "6.53.0"
+version = "6.54.0"
 
 [[deps.StrideArraysCore]]
 deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"]
@@ -912,6 +925,7 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"
 [[deps.SuiteSparse_jll]]
 deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"]
 uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
+version = "5.10.1+0"
 
 [[deps.Sundials]]
 deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SnoopPrecompile", "SparseArrays", "Sundials_jll"]
@@ -928,6 +942,7 @@ version = "5.2.1+0"
 [[deps.TOML]]
 deps = ["Dates"]
 uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
+version = "1.0.0"
 
 [[deps.TableTraits]]
 deps = ["IteratorInterfaceExtensions"]
@@ -937,13 +952,14 @@ version = "1.0.1"
 
 [[deps.Tables]]
 deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"]
-git-tree-sha1 = "5ce79ce186cc678bbb5c5681ca3379d1ddae11a1"
+git-tree-sha1 = "7149a60b01bf58787a1b83dad93f90d4b9afbe5d"
 uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
-version = "1.7.0"
+version = "1.8.1"
 
 [[deps.Tar]]
 deps = ["ArgTools", "SHA"]
 uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
+version = "1.10.0"
 
 [[deps.Test]]
 deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
@@ -992,9 +1008,9 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
 
 [[deps.Unitful]]
 deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"]
-git-tree-sha1 = "b649200e887a487468b71821e2644382699f1b0f"
+git-tree-sha1 = "d57a4ed70b6f9ff1da6719f5f2713706d57e0d66"
 uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
-version = "1.11.0"
+version = "1.12.0"
 
 [[deps.VectorizationBase]]
 deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"]
@@ -1011,6 +1027,7 @@ version = "0.2.0"
 [[deps.Zlib_jll]]
 deps = ["Libdl"]
 uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
+version = "1.2.12+3"
 
 [[deps.ZygoteRules]]
 deps = ["MacroTools"]
@@ -1021,11 +1038,14 @@ version = "0.2.2"
 [[deps.libblastrampoline_jll]]
 deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
 uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
+version = "5.1.1+0"
 
 [[deps.nghttp2_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
+version = "1.48.0+0"
 
 [[deps.p7zip_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
+version = "17.4.0+0"

test/include_all.jl

@@ -17,17 +17,16 @@ end
 
 
 Test.@testset "Test units, uncertainties" begin
-    Test.@test_skip include("TestUnitAsString.jl")  # skip since MonteCarloMeasurements hangs in newest DiffEqBase 
-                                                    # see https://github.com/SciML/DiffEqBase.jl/issues/828
+    include("TestUnitAsString.jl")
     include("TestUnits.jl")
     include("TestUncertainties.jl")
     include("TestUnitsAndUncertainties.jl")
     include("TestTwoInertiasAndIdealGear.jl")
     include("TestTwoInertiasAndIdealGearWithUnits.jl")
     include("TestTwoInertiasAndIdealGearWithUnitsAndUncertainties.jl")
-    Test.@test_skip include("TestTwoInertiasAndIdealGearWithMonteCarlo.jl")
-    Test.@test_skip include("TestTwoInertiasAndIdealGearWithUnitsAndMonteCarlo.jl")
-    Test.@test_skip include("TestLinearEquationSystemWithUnitsAndMonteCarlo.jl")
+    include("TestTwoInertiasAndIdealGearWithMonteCarlo.jl")
+    include("TestTwoInertiasAndIdealGearWithUnitsAndMonteCarlo.jl")
+    include("TestLinearEquationSystemWithUnitsAndMonteCarlo.jl")
 end