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🎨 README updated
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‎README.md‎

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@@ -67,7 +67,7 @@ This pipeline enables robust reconstruction of critical protein regions, advanci
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| `json/` | Metadata and parameter configuration files |
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| `outputs/` | Generated results (created during execution) |
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| `src/instanexus/` | Core InstaNexus package |
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| `src/instanexus/main.py` | **Master orchestrator** (runs the full pipeline) |
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| `src/instanexus/main.py` | Runs the full pipeline |
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| `src/instanexus/preprocessing.py` | Module for data cleaning |
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| `src/instanexus/assembly.py` | Module for sequence assembly |
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| `src/instanexus/clustering.py` | Module for clustering (mmseqs2) |

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