📝 Docs: Add logger on demo notebooks to avoid CI error until the new pip release is done

sayalaruano · sayalaruano · commit 2868c6d1c20b · 2025-02-13T16:03:10.000+01:00
diff --git a/docs/vuegen_basic_case_study.ipynb b/docs/vuegen_basic_case_study.ipynb
@@ -157,7 +157,7 @@
    "source": [
     "# Generate the report\n",
     "report_type = \"streamlit\"\n",
-    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"
+    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example\"))"
    ]
   },
   {
@@ -190,7 +190,7 @@
    "source": [
     "# Generate the report\n",
     "report_type = \"html\"\n",
-    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"
+    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example\"))"
    ]
   },
   {
@@ -300,7 +300,7 @@
    "source": [
     "# Test the changes by generarating the report from the modified YAML file\n",
     "report_type = \"streamlit\"\n",
-    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"
+    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example_extended\"))"
    ]
   },
   {
@@ -333,7 +333,7 @@
    "source": [
     "# Test the changes by generarating the report from the modified YAML file\n",
     "report_type = \"html\"\n",
-    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"
+    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example_extended\"))"
    ]
   }
  ],
diff --git a/docs/vuegen_case_study_earth_microbiome.ipynb b/docs/vuegen_case_study_earth_microbiome.ipynb
@@ -1379,7 +1379,7 @@
    "source": [
     "# Generate the report\n",
     "report_type = \"streamlit\"\n",
-    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"
+    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example\"))"
    ]
   },
   {
@@ -1412,7 +1412,7 @@
    "source": [
     "# Generate the report\n",
     "report_type = \"html\"\n",
-    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"
+    "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example\"))"
    ]
   },
   {
@@ -1558,7 +1558,7 @@
    "source": [
     "# Test the changes by generarating the report from the modified YAML file\n",
     "report_type = \"streamlit\"\n",
-    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"
+    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example_extended\"))"
    ]
   },
   {
@@ -1591,7 +1591,7 @@
    "source": [
     "# Test the changes by generarating the report from the modified YAML file\n",
     "report_type = \"html\"\n",
-    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"
+    "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example_extended\"))"
    ]
   }
  ],

Original file line number	Diff line number	Diff line change
`@@ -157,7 +157,7 @@`
`157`	`157`	`"source": [`
`158`	`158`	`"# Generate the report\n",`
`159`	`159`	`"report_type = \"streamlit\"\n",`
`160`		`- "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"`
	`160`	`+ "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example\"))"`
`161`	`161`	`]`
`162`	`162`	`},`
`163`	`163`	`{`
`@@ -190,7 +190,7 @@`
`190`	`190`	`"source": [`
`191`	`191`	`"# Generate the report\n",`
`192`	`192`	`"report_type = \"html\"\n",`
`193`		`- "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"`
	`193`	`+ "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example\"))"`
`194`	`194`	`]`
`195`	`195`	`},`
`196`	`196`	`{`
`@@ -300,7 +300,7 @@`
`300`	`300`	`"source": [`
`301`	`301`	`"# Test the changes by generarating the report from the modified YAML file\n",`
`302`	`302`	`"report_type = \"streamlit\"\n",`
`303`		`- "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"`
	`303`	`+ "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example_extended\"))"`
`304`	`304`	`]`
`305`	`305`	`},`
`306`	`306`	`{`
`@@ -333,7 +333,7 @@`
`333`	`333`	`"source": [`
`334`	`334`	`"# Test the changes by generarating the report from the modified YAML file\n",`
`335`	`335`	`"report_type = \"html\"\n",`
`336`		`- "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"`
	`336`	`+ "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_basic_example_extended\"))"`
`337`	`337`	`]`
`338`	`338`	`}`
`339`	`339`	`],`
Original file line number	Diff line number	Diff line change
`@@ -1379,7 +1379,7 @@`
`1379`	`1379`	`"source": [`
`1380`	`1380`	`"# Generate the report\n",`
`1381`	`1381`	`"report_type = \"streamlit\"\n",`
`1382`		`- "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"`
	`1382`	`+ "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example\"))"`
`1383`	`1383`	`]`
`1384`	`1384`	`},`
`1385`	`1385`	`{`
`@@ -1412,7 +1412,7 @@`
`1412`	`1412`	`"source": [`
`1413`	`1413`	`"# Generate the report\n",`
`1414`	`1414`	`"report_type = \"html\"\n",`
`1415`		`- "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = None)"`
	`1415`	`+ "report_generator.get_report(dir_path = base_output_dir, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example\"))"`
`1416`	`1416`	`]`
`1417`	`1417`	`},`
`1418`	`1418`	`{`
`@@ -1558,7 +1558,7 @@`
`1558`	`1558`	`"source": [`
`1559`	`1559`	`"# Test the changes by generarating the report from the modified YAML file\n",`
`1560`	`1560`	`"report_type = \"streamlit\"\n",`
`1561`		`- "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"`
	`1561`	`+ "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example_extended\"))"`
`1562`	`1562`	`]`
`1563`	`1563`	`},`
`1564`	`1564`	`{`
`@@ -1591,7 +1591,7 @@`
`1591`	`1591`	`"source": [`
`1592`	`1592`	`"# Test the changes by generarating the report from the modified YAML file\n",`
`1593`	`1593`	`"report_type = \"html\"\n",`
`1594`		`- "report_generator.get_report(config_path = config_path, report_type = report_type, logger = None)"`
	`1594`	`+ "report_generator.get_report(config_path = config_path, report_type = report_type, logger = get_logger(f\"{report_type}_report_EMP_example_extended\"))"`
`1595`	`1595`	`]`
`1596`	`1596`	`}`
`1597`	`1597`	`],`