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update config
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3 files changed

+3
-122
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3 files changed

+3
-122
lines changed

gen3-gitops/values/etl.yaml

Lines changed: 0 additions & 13 deletions
Original file line numberDiff line numberDiff line change
@@ -25,19 +25,6 @@ etl:
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- name: exposure_media
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parent_props:
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- path: resources[resource_short_name:short_name, resource_url, resource_description:description, domain, keywords, access_type, strengths, limitations, example_applications, tools_supporting_uses].projects[project_sponsor, project_sponsor_type]
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- name: chordstaging_geospatial_tool_resource
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doc_type: geospatial_tool_resource
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type: aggregator
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root: geospatial_tool_resource
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props:
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- name: project_id
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- name: submitter_id
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- name: tool_type
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- name: intended_use
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- name: operating_system
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- name: languages
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parent_props:
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- path: resources[resource_short_name:short_name, resource_description:description, domain, keywords, access_type, payment_required, strengths, limitations, example_applications, tools_supporting_uses].projects[project_sponsor, project_sponsor_type]
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- name: chordstaging_population_data_resource
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doc_type: population_data_resource
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type: aggregator

gen3-gitops/values/portal.yaml

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@@ -390,11 +390,6 @@ portal:
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"name": "Population Data Resource",
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"plural": "Population Data Resources"
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},
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{
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"graphql": "_geospatial_tool_resource_count",
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"name": "Geospatial Tool Resource",
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"plural": "Geospatial Tool Resources"
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},
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{
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"graphql": "_key_data_resource_count",
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"name": "Key Dataset",
@@ -412,11 +407,6 @@ portal:
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"name": "Population Data Resource",
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"plural": "Population Data Resources"
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},
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{
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"graphql": "_geospatial_tool_resource_count",
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"name": "Geospatial Tool Resource",
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"plural": "Geospatial Tool Resources"
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},
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{
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"graphql": "_key_data_resource_count",
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"name": "Key Dataset",
@@ -489,7 +479,7 @@ portal:
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"useProfileDropdown": false,
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"login": {
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"title": "CHORDS - Connecting Health Outcomes Research Data Systems",
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"subTitle": "Explore, Analyze, and Share Environment and Health Resources",
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"subTitle": "Explore, Analyze, and Share Environmental and Health Resources",
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"text": "",
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"contact": "If you have any questions about access or the registration process, please contact ",
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"email": "mike.conway@nih.gov"
@@ -506,7 +496,7 @@ portal:
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"alt": "Center for Translational Data Science at the University of Chicago"
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},
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{
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"src": "custom/ospcortf_logo.jpg",
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"src": "custom/images/ospcortf_logo.jpg",
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"href": "https://aspe.hhs.gov/enhancing-patient-centered-outcomes-research-pcor-creating-national-small-area-social-determinants",
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"alt": "Patient-Centered Outcomes Research Trust Fund"
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}
@@ -1187,102 +1177,6 @@ portal:
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"accessibleValidationField": "project_id"
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}
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},
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{
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"tabTitle": "Geospatial Tool Resources",
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"charts": {
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"domain": {
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"chartType": "count",
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"title": "Domain"
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}
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},
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"filters": {
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"tabs": [
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{
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"title": "Search Facets",
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"fields": [
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"project_sponsor",
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"project_sponsor_type",
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"domain",
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"keywords",
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"tool_type",
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"operating_system",
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"languages"
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]
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}
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]
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},
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"table": {
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"enabled": true,
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"fields": [
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"project_sponsor",
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"resource_short_name",
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"resource_description",
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"domain",
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"keywords",
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"access_type",
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"tool_type",
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"operating_system",
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"languages"
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],
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"linkFields": [
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"resource_url"
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]
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},
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"dropdowns": {
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"download-table": {
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"title": "Download Dataset Table"
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}
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},
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"buttons": [
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{
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"enabled": true,
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"type": "data-json",
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"title": "JSON",
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"dropdownId": "download-table",
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"leftIcon": "datafile",
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"rightIcon": "download",
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"fileName": "datasets_table.json"
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},
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{
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"enabled": true,
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"type": "data-tsv",
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"title": "TSV",
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"dropdownId": "download-table",
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"leftIcon": "datafile",
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"rightIcon": "download",
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"fileName": "datasets_table.tsv"
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},
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{
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"enabled": true,
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"type": "data-csv",
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"title": "CSV",
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"dropdownId": "download-table",
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"leftIcon": "datafile",
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"rightIcon": "download",
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"fileName": "datasets_table.csv"
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}
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],
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"loginForDownload": true,
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"guppyConfig": {
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"dataType": "geospatial_tool_resource",
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"nodeCountTitle": "Geospatial Tool Resources",
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"fieldMapping": [
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{
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"field": "project_id",
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"name": "Dataset ID"
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},
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{
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"field": "submitter_id",
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"name": "Dataset Name"
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}
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],
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"accessibleFieldCheckList": [
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"project_id"
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],
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"accessibleValidationField": "project_id"
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}
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},
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{
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"tabTitle": "Key Data Resources",
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"charts": {

pcor_tools/generate_gen3_gitops_values.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -21,7 +21,7 @@
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logger = logging.getLogger(__name__)
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# Set the flag to True for AWS Staging(gen3-gitops)
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AWS_STAGING_FLAG = True
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AWS_STAGING_FLAG = False
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if AWS_STAGING_FLAG:
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# Get the current month and day
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values_current_month_day = datetime.now().strftime("aws_values_%y_%m_%d")

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