update checkout and setup-python versions

for both current project as well as in cookiecutter

Author: DaniBodor

.github/workflows/cffconvert.yml

@@ -11,7 +11,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Check out a copy of the repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - name: Check whether the citation metadata from CITATION.cff is valid
         uses: citation-file-format/[email protected]

.github/workflows/markdown-link-check.yml

@@ -14,7 +14,7 @@ jobs:
     name: Check markdown links
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - uses: gaurav-nelson/github-action-markdown-link-check@v1
       with:
         config-file: '.mlc-config.json'

.github/workflows/tests.yml

@@ -18,9 +18,9 @@ jobs:
         os: ['ubuntu-latest', 'macos-latest', 'windows-latest']
         python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v3
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Python info

{{cookiecutter.directory_name}}/.github/workflows/build.yml

@@ -19,9 +19,9 @@ jobs:
         os: ['ubuntu-latest', 'macos-latest', 'windows-latest']
         python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Set up Python ${{ '{{ ' -}} matrix.python-version }}
-        uses: actions/setup-python@v3
+        uses: actions/setup-python@v5
         with:
           python-version: ${{ '{{ ' -}} matrix.python-version }}
       - name: Python info
@@ -44,9 +44,9 @@ jobs:
     strategy:
       fail-fast: false
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Set up Python 3.9
-        uses: actions/setup-python@v3
+        uses: actions/setup-python@v5
         with:
           python-version: 3.9
       - name: Python info

{{cookiecutter.directory_name}}/.github/workflows/cffconvert.yml

@@ -14,7 +14,7 @@ jobs:
     name: "cffconvert"
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         name: Check out a copy of the repository
 
       - name: Check whether the citation metadata from CITATION.cff is valid

{{cookiecutter.directory_name}}/.github/workflows/documentation.yml

@@ -15,9 +15,9 @@ jobs:
     strategy:
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
       - name: Set up Python 3.9
-        uses: actions/setup-python@v3
+        uses: actions/setup-python@v5
         with:
           python-version: 3.9
       - name: Python info
@@ -33,4 +33,4 @@ jobs:
         run: sudo apt install pandoc        
       - name: Build documentation
         run: make coverage doctest html
-        working-directory: docs
+        working-directory: docs

{{cookiecutter.directory_name}}/.github/workflows/markdown-link-check.yml

@@ -14,7 +14,7 @@ jobs:
     name: Check markdown links
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - uses: gaurav-nelson/github-action-markdown-link-check@v1
       with:
         config-file: '.mlc-config.json'

{{cookiecutter.directory_name}}/.github/workflows/next_steps.yml

@@ -7,7 +7,7 @@ jobs:
   next_steps:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Create Sonarcloud integration issue
         uses: JasonEtco/create-an-issue@v2
         env:

{{cookiecutter.directory_name}}/.github/workflows/sonarcloud.yml

@@ -15,11 +15,11 @@ jobs:
     name: SonarCloud
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0  # Shallow clones should be disabled for a better relevancy of analysis
       - name: Set up Python
-        uses: actions/setup-python@v3
+        uses: actions/setup-python@v5
         with:
           python-version: 3.9
       - name: Python info