add commented out module loads and PREFIX for local building on workstation for now, also make an attempt at fixing the split_ncvars tests

Author: ilaflott

build.sh

@@ -2,6 +2,17 @@
 
 set -ex
 
+## testing locally on ppan/ workstation
+#module load gcc
+#module load hdf5
+#module load mpich
+#module load hdf5
+#module load netcdf-c
+#module load nco
+#module load netcdf-fortran/
+#module list
+
+
 echo ""
 which nc-config
 echo "we have nc-config"
@@ -73,6 +84,7 @@ echo ""
 echo 'building FRE-NCtools conda package...'
 
 ## this is sufficient
+#PREFIX=/home/inl/Working/fre-nctools/FRENCTOOLS
 autoreconf -iv
 ./configure --prefix=$PREFIX --enable-quad-precision --with-mpi || cat config.log
 #./configure --with-mpi || cat config.log

tests/split_ncvars/split_ncvars

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin
@@ -52,4 +52,4 @@ split_ncvars.pl test_input_*.nc || fail_ split_ncvars.pl multiple input files fa
 test -f var1.nc || fail_ var1.nc not created with multiple input files
 test -f var2.nc || fail_ var2.nc not created with multiple input files
 # Verify there are 60 time steps
-ncdump -h var1.nc | grep -q '60 currently' || fail_ var1.nc does not have 60 time steps
+ncdump -h var1.nc | grep -q '60 currently' || fail_ var1.nc does not have 60 time steps

tests/split_ncvars/split_ncvars-i

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin

tests/split_ncvars/split_ncvars-l

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin

tests/split_ncvars/split_ncvars-o

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin

tests/split_ncvars/split_ncvars-p

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin

tests/split_ncvars/split_ncvars-s

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin

tests/split_ncvars/split_ncvars-v

@@ -24,7 +24,7 @@ then
     command -v split_ncvars.pl --version
 fi
 
-. ${srcdir=.}/init.sh; path_prepend_ ../../src
+. ${srcdir=.}/init.sh; path_prepend_ ../src
 
 # Need to use the included list_ncvars.sh script.  Otherwise,
 # split_ncvars will look for list_ncvars.sh in the installed bin