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reogranize hpc docs
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docs/hpc/01_getting_started/02_getting_and_renewing_an_account.md

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If you are part of collaboration with NYU researcher you need to obtain an **affiliate** status before applying for an NYU HPC account. A full-time NYU faculty member must sponsor a non-NYU collaborator for an affiliate status.
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Please see [instructions for affiliate management][affiliate and account management link] (NYU NetID login is required to follow the link). \[Please read instructions about sponsoring external collaborators].
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Please see [instructions for affiliate management][affiliate and account management link] (NYU NetID login is required to follow the link). [Please read instructions about sponsoring external collaborators here](./05_hpc_accounts_external_collaborators.md).
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## Access to cluster after Graduation

docs/hpc/01_getting_started/05_hpc_accounts_external_collaborators.md

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- The first step is to sponsor a collaborator for an NYU netid (if they do not have one already). A department administrator or the faculty sponsor must submit the [Affiliate Management Form](https://identity.it.nyu.edu/identityiq/plugins/pluginPage.jsf?pn=AffiliateManagement) (the link is only accessible over VPN, or within NYU-Net).
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- Once a netid for the external collaborator is created, the collaborator must submit the [Request for an NYU HPC account](https://identity.it.nyu.edu/identityiq/workitem/commonWorkItem.jsf#/commonWorkItem/session).
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:::tip
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- The collaborator must setup VPN access to be able to access the HPC account request form.
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- The collaborator must setup [VPN access][nyu vpn link] to be able to access the HPC account request form.
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- The collaborator must enter in the account request form the Netid of the sponsoring NYU Full time faculty
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- The collaborator should select "External Collaborator" as Affiliation, when filing the HPC account request form.
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:::
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- Once the HPC request is submitted, the sponsoring faculty will receive an email with a link to approve (or deny) the HPC account request for the external collaborator. The account approval link can only be accessed over VPN.
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- Once the HPC request is submitted, the sponsoring faculty will receive an email with a [link to approve (or deny) the HPC account request](https://identity.it.nyu.edu/identityiq/workitem/workItems.jsf#/workItems) for the external collaborator. The [account approval link](https://identity.it.nyu.edu/identityiq/workitem/workItems.jsf#/workItems) can only be accessed [over VPN][nyu vpn link].
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:::note
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Once the sponsoring faculty approves the account request, the HPC account is created within one hour.
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:::

docs/hpc/02_connecting_to_hpc/01_connecting_to_hpc.md

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# Accessing HPC Instructions
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[putty link]: https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html
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[ssh instructions keygen link]: https://www.ssh.com/ssh/keygen/
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## Introduction
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# Connecting to the HPC Cluster
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There are several ways to interact with the Greene HPC cluster. Similar to other Linux clusters, the most common method of connection is via a Command Line Interface (CLI). A CLI is a program that allows you to create and delete files, run programs, and navigate through directories and files via a typed prompt. On Mac, the built-in CLI application is called Terminal. While Windows 11 machines support a Linux Subsystem, which allows for similar functionality, a popular tool used to connect to a Linux server is a free application called [PuTTY][putty link].
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