Input data updates #150
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| name: docker-compose-actions-workflow | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| schedule: | |
| - cron: '0 0 1,15 * *' # First and fifteenth of month “At 00:00” | |
| jobs: | |
| docker_compose: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 120 | |
| name: Tests Dockerfile | |
| container: docker | |
| steps: | |
| - name: "Checkout" | |
| uses: actions/checkout@v3 | |
| - name: Install rsync | |
| run: apk update && apk add --no-cache rsync | |
| - name: create data directory | |
| working-directory: ./ | |
| run: | | |
| mkdir -p ./docker_actions/ | |
| chmod 755 ./docker_actions/ | |
| ls -ld ./docker_actions/ | |
| ls -l ./docker_actions/ | |
| rsync -a .github/docker_actions/ ./docker_actions/ | |
| rsync -a --exclude='input_sheet_final.xlsm' --exclude='docker-compose.yml' ./docker/ ./docker_actions/ | |
| ls -l ./docker_actions/docker-compose.yml | |
| cat ./docker_actions/docker-compose.yml | |
| ls -l ./docker_actions/dgen/input_sheet_final.xlsm | |
| md5sum ./docker_actions/dgen/input_sheet_final.xlsm | |
| rm -rf ./docker_actions/dgen_data/ | |
| rm -rf ./docker_actions/postgresql_data/ | |
| mkdir -p ./docker_actions/dgen_data/ | |
| chmod 755 ./docker_actions/dgen_data/ | |
| chown -R 999:999 ./docker_actions/dgen_data/ | |
| ls -ld ./docker_actions/dgen_data/ | |
| ls -l ./docker_actions/dgen_data/ | |
| - name: "Builds the docker composed image and the docker compose" | |
| id: build | |
| working-directory: ./docker_actions/ | |
| run: | | |
| docker compose down | |
| docker system prune -a -f # remove all stopped containers and dangling images | |
| docker compose up --build -d | |
| - name: "Pause for database to finish set up" | |
| run: | | |
| echo "Sleeping for 5 minutes to download files and allow the database to set up" | |
| sleep 300s # 5 minutes may not be long enough if internet is slow | |
| - name: "Test running dgen model python script" | |
| working-directory: ./docker_actions/ | |
| run: | | |
| export CONTAINER_ID=$(docker ps -q --filter "name=dgen") | |
| echo "Container ID: ${CONTAINER_ID}" | |
| result=$(docker exec -u dgen "${CONTAINER_ID}" bash -c ' \ | |
| source ~/.bashrc \ | |
| && cd /opt/dgen_os/python \ | |
| && /docker-entrypoint-initdb.d/init-dgen.sh \ | |
| && source /opt/conda/bin/activate dg3n \ | |
| && python dgen_model.py \ | |
| && echo "Success: $?"') | |
| echo "Result: $(echo $result)" | |
| if [[ $(echo $result |grep -c "Success: 0") -eq 0 ]]; then | |
| echo "Dgen model script failed." | |
| exit 1 | |
| else | |
| echo "Dgen model script executed successfully." | |
| fi |